miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42372_osa-MIR2124c:mirbase
Length = 248
Score = 218 bits (110), Expect = 2e-57
Identities = 176/198 (88%)
Strand = Plus / Plus
Query: 55 acagtttgcatgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgata 114
||||||| | |||||||||||||| |||||||||| ||||||||||||||||||||| |
Sbjct: 51 acagtttacgtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgaca 110
Query: 115 atatggtgttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtct 174
| ||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 111 acgtggtggtacagtaaatatttgctaatgatagattaattaggcttaataaattcgtct 170
Query: 175 cttggtttacaggcggatcctgcaatttgttttgttattagactacgtttaatactttaa 234
| | |||| | |||||| ||| ||||| |||||||||||||| ||||||||||||||||
Sbjct: 171 cgtagttttctggcggaatctgtaatttattttgttattagacaacgtttaatactttaa 230
Query: 235 atgtgtgtccgtatattc 252
||||||||||||||||||
Sbjct: 231 atgtgtgtccgtatattc 248
>42371_osa-MIR2124b:mirbase
Length = 239
Score = 216 bits (109), Expect = 6e-57
Identities = 212/249 (85%), Gaps = 13/249 (5%)
Strand = Plus / Plus
Query: 4 tttgaacacatgcatggagtattaaatgttgacgaaaaaataactacttaaacagtttgc 63
|||| |||||||||||||||||||||| | |||||||||||||||| ||| |||| ||||
Sbjct: 4 tttggacacatgcatggagtattaaatatagacgaaaaaataactaattacacagattgc 63
Query: 64 atgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgataatatggtgt 123
|||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 64 gtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgc 123
Query: 124 tacagtaaacttttgctaatgatagattaattagccttaacaaattcgtctcttggttta 183
|||||||||| ||||||||| |||||||||| ||||| |||||||| || ||||||
Sbjct: 124 tacagtaaacatttgctaataccggattaattaggcttaataaattcgtgtcgcggttta 183
Query: 184 caggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatgtgtgtc 243
|||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 184 caggcgga-------------ttcattattagactacgtttaatactttaaatgtgtgtc 230
Query: 244 cgtatattc 252
|||||||||
Sbjct: 231 cgtatattc 239
>42374_osa-MIR2124e:mirbase
Length = 247
Score = 210 bits (106), Expect = 4e-55
Identities = 214/250 (85%), Gaps = 5/250 (2%)
Strand = Plus / Plus
Query: 3 gtttgaacacatgcatggagtattaaatgttgacgaaaaaataactacttaaacagtttg 62
||||| |||||||||||||||||||||| | |||||| ||| | ||| ||| |||
Sbjct: 3 gtttggacacatgcatggagtattaaatat-----aaaaaaaaaccaattacacaaattg 57
Query: 63 catgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgataatatggtg 122
| |||||||||||||| ||||||||||| |||||||| ||||||||||| ||| |||||
Sbjct: 58 cgtgtaaattgcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtg 117
Query: 123 ttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtctcttggttt 182
|||| ||||| ||||||||||| ||||||||||| | ||| ||||||||||| ||||
Sbjct: 118 ctacaataaacatttgctaatgacagattaattagacataataaattcgtctcgcagttt 177
Query: 183 acaggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatgtgtgt 242
| ||||||| || |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 178 ataggcggaatatgtaatttgttttgttattagtctacgtttaatactttaaatgtgtgt 237
Query: 243 ccgtatattc 252
||||||||||
Sbjct: 238 ccgtatattc 247
>42376_osa-MIR2124g:mirbase
Length = 251
Score = 200 bits (101), Expect = 4e-52
Identities = 203/237 (85%)
Strand = Plus / Plus
Query: 16 catggagtattaaatgttgacgaaaaaataactacttaaacagtttgcatgtaaattgcg 75
||||||||||||||| | ||| |||||||||| ||| |||| |||| |||||||||||
Sbjct: 15 catggagtattaaatataatcgagaaaataactaattacacagattgcgtgtaaattgcg 74
Query: 76 agatgaatcttttaactctaattgcgccatgatttgataatatggtgttacagtaaactt 135
| | ||||||||||| ||||||| ||||||| ||| ||| || || |||||||||| |
Sbjct: 75 acacgaatcttttaagcataattgctccatgatctgacaatgtgatgctacagtaaacat 134
Query: 136 ttgctaatgatagattaattagccttaacaaattcgtctcttggtttacaggcggatcct 195
|||||||| | ||||||||| ||||| ||||||||||| ||||||||||||||| ||
Sbjct: 135 ttgctaataacgaattaattagtcttaataaattcgtctcgcggtttacaggcggattct 194
Query: 196 gcaatttgttttgttattagactacgtttaatactttaaatgtgtgtccgtatattc 252
|||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 195 ctaatttgttttgttattagtctacatttaatactttaaatgtgtgtccgtatattc 251
>42370_osa-MIR2124a:mirbase
Length = 249
Score = 184 bits (93), Expect = 2e-47
Identities = 171/197 (86%)
Strand = Plus / Plus
Query: 55 acagtttgcatgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgata 114
|||| |||||||||||| |||||| ||||||||| | |||||| ||||||||||| |
Sbjct: 52 acagattgcatgtaaatcgcgagacgaatcttttgagcctaattataccatgatttgaca 111
Query: 115 atatggtgttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtct 174
|| ||||| ||||||||| ||||||||||| |||||||||| ||||| ||||| ||||
Sbjct: 112 atgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataaatttgtct 171
Query: 175 cttggtttacaggcggatcctgcaatttgttttgttattagactacgtttaatactttaa 234
| ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 172 cgcagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaatactttaa 231
Query: 235 atgtgtgtccgtatatt 251
|||||||||||||||||
Sbjct: 232 atgtgtgtccgtatatt 248
>42079_osa-MIR442:mirbase
Length = 233
Score = 182 bits (92), Expect = 9e-47
Identities = 176/204 (86%)
Strand = Plus / Plus
Query: 38 aaaaaataactacttaaacagtttgcatgtaaattgcgagatgaatcttttaactctaat 97
|||||||||||| ||| |||| | | |||||||||||||| ||||||||||| |||||
Sbjct: 30 aaaaaataactaattatacagatgacgtgtaaattgcgagacgaatcttttaagcctaat 89
Query: 98 tgcgccatgatttgataatatggtgttacagtaaacttttgctaatgatagattaattag 157
||| ||||||| ||| ||| ||||| |||||||||| ||||||||||| ||||||||||
Sbjct: 90 tgctccatgatctgacaatgtggtgctacagtaaacatttgctaatgacggattaattag 149
Query: 158 ccttaacaaattcgtctcttggtttacaggcggatcctgcaatttgttttgttattagac 217
||||| ||||||||||| |||||||| ||||| ||| |||||||||||||||||| |
Sbjct: 150 gcttaataaattcgtctcgcagtttacagacggattctgtaatttgttttgttattagtc 209
Query: 218 tacgtttaatactttaaatgtgtg 241
|||||| ||||||| |||||||||
Sbjct: 210 tacgttaaatacttcaaatgtgtg 233
>42373_osa-MIR2124d:mirbase
Length = 250
Score = 174 bits (88), Expect = 2e-44
Identities = 163/188 (86%)
Strand = Plus / Plus
Query: 65 tgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgataatatggtgtt 124
|||||||||||||| ||||||||||| |||||||||| ||||||||| ||| ||||| |
Sbjct: 63 tgtaaattgcgagaggaatcttttaagcctaattgcgctatgatttgacaatgtggtgct 122
Query: 125 acagtaaacttttgctaatgatagattaattagccttaacaaattcgtctcttggtttac 184
|||||||| ||||||||||| ||||||||| ||||| ||||||| ||| |||| |
Sbjct: 123 acagtaaatatttgctaatgacgaattaattaggcttaataaattcgactcgcagttttc 182
Query: 185 aggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatgtgtgtcc 244
|||||| ||| ||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 183 tggcggaatctgtaatttattttgttattagactatgtttaatactttaaatgtgtgtcc 242
Query: 245 gtatattc 252
||||||||
Sbjct: 243 gtatattc 250
>42378_osa-MIR2124i:mirbase
Length = 250
Score = 153 bits (77), Expect = 8e-38
Identities = 164/193 (84%)
Strand = Plus / Plus
Query: 60 ttgcatgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgataatatg 119
|||| ||||||||| || | ||||||||||| |||||||| ||||||| ||| ||| ||
Sbjct: 58 ttgcgtgtaaattgtgaaacgaatcttttaagcctaattgctccatgatctgacaatgtg 117
Query: 120 gtgttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtctcttgg 179
||| |||||||||| |||| |||| || ||||||| || ||||| ||||||| ||| | |
Sbjct: 118 gtgctacagtaaacatttgttaataatggattaatcaggcttaataaattcgcctcgtag 177
Query: 180 tttacaggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatgtg 239
|||||| | ||| ||| ||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 178 tttacaagtggaatctgtaatttgtttcgttgttagcctacgtttaatactttaaatgtg 237
Query: 240 tgtccgtatattc 252
|||||||||||||
Sbjct: 238 tgtccgtatattc 250
>42377_osa-MIR2124h:mirbase
Length = 275
Score = 109 bits (55), Expect = 1e-24
Identities = 115/135 (85%)
Strand = Plus / Plus
Query: 118 tggtgttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtctctt 177
||||| |||||||||| | |||||| || |||||||||| ||||| ||||| |||||
Sbjct: 138 tggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttgtctcgc 197
Query: 178 ggtttacaggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatg 237
|||||||| | ||| ||| |||||||||| ||| ||| ||| |||||||||||||||||
Sbjct: 198 ggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatactttaaatg 257
Query: 238 tgtgtccgtatattc 252
|||||||||||||||
Sbjct: 258 tgtgtccgtatattc 272
>42092_osa-MIR445a:mirbase
Length = 268
Score = 85.7 bits (43), Expect = 2e-17
Identities = 88/103 (85%)
Strand = Plus / Minus
Query: 73 gcgagatgaatcttttaactctaattgcgccatgatttgataatatggtgttacagtaaa 132
|||||| ||||||||| | ||||||| | ||||||||||| ||| || || |||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 133 cttttgctaatgatagattaattagccttaacaaattcgtctc 175
||||| |||| || |||||||||| ||||| |||||||||||
Sbjct: 126 cttttcataattatggattaattaggcttaaaaaattcgtctc 84
>42099_osa-MIR445h:mirbase
Length = 277
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 127 agtaaacttttgctaatgatagattaattagccttaacaaattcgtctc 175
||||||||||| |||| || |||||||||| ||||| |||||||||||
Sbjct: 145 agtaaacttttcataattatggattaattaggcttaaaaaattcgtctc 97
>42098_osa-MIR445g:mirbase
Length = 275
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 127 agtaaacttttgctaatgatagattaattagccttaacaaattcgtctc 175
||||||||||| |||| || |||||||||| ||||| |||||||||||
Sbjct: 144 agtaaacttttcataattatggattaattaggcttaaaaaattcgtctc 96
>42096_osa-MIR445e:mirbase
Length = 265
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 127 agtaaacttttgctaatgatagattaattagccttaacaaattcgtctc 175
||||||||||| |||| || |||||||||| ||||| |||||||||||
Sbjct: 139 agtaaacttttcataattatggattaattaggcttaaaaaattcgtctc 91
>42094_osa-MIR445c:mirbase
Length = 260
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 127 agtaaacttttgctaatgatagattaattagccttaacaaattcgtctc 175
||||||||||| |||| || |||||||||| ||||| |||||||||||
Sbjct: 137 agtaaacttttcataattatggattaattaggcttaaaaaattcgtctc 89
>42097_osa-MIR445f:mirbase
Length = 305
Score = 46.1 bits (23), Expect = 1e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 127 agtaaacttttgctaatgatagattaattagccttaacaaattcgtc 173
||||||||||| |||| || |||||||||| ||||| |||||||||
Sbjct: 160 agtaaacttttcataattatggattaattaggcttaaaaaattcgtc 114
>42093_osa-MIR445b:mirbase
Length = 264
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 127 agtaaacttttgctaatgatagattaattagccttaacaaattcgtctc 175
||||||||||| |||| || |||||||||| ||||| || ||||||||
Sbjct: 138 agtaaacttttcataattatggattaattaggcttaaaaagttcgtctc 90
