miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42374_osa-MIR2124e:mirbase
Length = 247
Score = 228 bits (115), Expect = 2e-60
Identities = 224/262 (85%), Gaps = 15/262 (5%)
Strand = Plus / Plus
Query: 11 atgtttggacacatgcatggagtattaaatataataaaaataactaattacacagattgt 70
|||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||
Sbjct: 1 atgtttggacacatgcatggagtattaaatataaaaaaaa--accaattacacaaattgc 58
Query: 71 gtgtaaattacgagatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgc 130
||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 59 gtgtaaattgcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtgc 118
Query: 131 tacaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaattt 190
||||| ||||||| |||||| || |||||||||| | |||||||||
Sbjct: 119 tacaa-------------taaacatttgctaatgacagattaattagacataataaattc 165
Query: 191 gtctcgcggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatact 250
||||||| ||||| | | ||||| ||||||||||||| ||| ||||||| ||||||||||
Sbjct: 166 gtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaatact 225
Query: 251 ttaaatgtgtgtccgtatattc 272
||||||||||||||||||||||
Sbjct: 226 ttaaatgtgtgtccgtatattc 247
>42370_osa-MIR2124a:mirbase
Length = 249
Score = 198 bits (100), Expect = 2e-51
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttg 191
||||||||||||||||||||| || |||||| || |||||||||||||||||||||||||
Sbjct: 109 acaatgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataaatttg 168
Query: 192 tctcgcggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatactt 251
|||||| ||||||| | ||||||||||||||||||| ||| ||||||| |||||||||||
Sbjct: 169 tctcgcagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaatactt 228
Query: 252 taaatgtgtgtccgtatatt 271
||||||||||||||||||||
Sbjct: 229 taaatgtgtgtccgtatatt 248
>42376_osa-MIR2124g:mirbase
Length = 251
Score = 182 bits (92), Expect = 1e-46
Identities = 209/250 (83%), Gaps = 16/250 (6%)
Strand = Plus / Plus
Query: 26 catggagtattaaatataata---aaaataactaattacacagattgtgtgtaaattacg 82
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||
Sbjct: 15 catggagtattaaatataatcgagaaaataactaattacacagattgcgtgtaaattgcg 74
Query: 83 agatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgctacaatgtggtg 142
| | ||||||||||||| |||||||| | |||| |||||||||| |||||||
Sbjct: 75 acacgaatcttttaagcataattgctccatgatctgacaatgtgatgctaca-------- 126
Query: 143 ctacagtaaacatatgctaacgagggattaattaggcttaataaatttgtctcgcggttt 202
|||||||| |||||| | | ||||||||| ||||||||||| ||||||||||||
Sbjct: 127 -----gtaaacatttgctaataacgaattaattagtcttaataaattcgtctcgcggttt 181
Query: 203 acaagtggaatctgtaatttgttttattactagtctatgtttaatactttaaatgtgtgt 262
||| | ||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||
Sbjct: 182 acaggcggattctctaatttgttttgttattagtctacatttaatactttaaatgtgtgt 241
Query: 263 ccgtatattc 272
||||||||||
Sbjct: 242 ccgtatattc 251
>42079_osa-MIR442:mirbase
Length = 233
Score = 163 bits (82), Expect = 9e-41
Identities = 198/239 (82%), Gaps = 17/239 (7%)
Strand = Plus / Plus
Query: 27 atggagtattaaatataat----aaaaataactaattacacagattgtgtgtaaattacg 82
|||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||
Sbjct: 8 atggagtattaaatataaatgaaaaaaataactaattatacagatgacgtgtaaattgcg 67
Query: 83 agatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgctacaatgtggtg 142
||| |||||||||||||||||||||| | |||| |||||| |||||||
Sbjct: 68 agacgaatcttttaagcctaattgctccatgatctgacaa-------------tgtggtg 114
Query: 143 ctacagtaaacatatgctaacgagggattaattaggcttaataaatttgtctcgcggttt 202
||||||||||||| |||||| || ||||||||||||||||||||||| ||||||| ||||
Sbjct: 115 ctacagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagttt 174
Query: 203 acaagtggaatctgtaatttgttttattactagtctatgtttaatactttaaatgtgtg 261
||| ||| ||||||||||||||| ||| ||||||| ||| ||||||| |||||||||
Sbjct: 175 acagacggattctgtaatttgttttgttattagtctacgttaaatacttcaaatgtgtg 233
>42378_osa-MIR2124i:mirbase
Length = 250
Score = 157 bits (79), Expect = 5e-39
Identities = 216/263 (82%), Gaps = 14/263 (5%)
Strand = Plus / Plus
Query: 11 atgtttggacacatgcatggagtattaaatataataaaaataac-taattacacagattg 69
|||||| |||| ||| ||| ||||||||||||| ||||| || |||||||| ||||||
Sbjct: 1 atgtttagacatatgtatgtagtattaaatatatgaaaaagaaaataattacatagattg 60
Query: 70 tgtgtaaattacgagatgaatcttttaagcctaattgcttcttgatttgacaatgtggtg 129
||||||||| || | |||||||||||||||||||||| | |||| ||||||
Sbjct: 61 cgtgtaaattgtgaaacgaatcttttaagcctaattgctccatgatctgacaa------- 113
Query: 130 ctacaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatt 189
|||||||||||||||||||| || ||| | |||||||| ||||||||||||||
Sbjct: 114 ------tgtggtgctacagtaaacatttgttaataatggattaatcaggcttaataaatt 167
Query: 190 tgtctcgcggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatac 249
| |||| |||||||||||||||||||||||||||| || ||| ||| |||||||||
Sbjct: 168 cgcctcgtagtttacaagtggaatctgtaatttgtttcgttgttagcctacgtttaatac 227
Query: 250 tttaaatgtgtgtccgtatattc 272
|||||||||||||||||||||||
Sbjct: 228 tttaaatgtgtgtccgtatattc 250
>42373_osa-MIR2124d:mirbase
Length = 250
Score = 153 bits (77), Expect = 9e-38
Identities = 125/141 (88%)
Strand = Plus / Plus
Query: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttg 191
||||||||||||||||||||| || |||||| || | ||||||||||||||||||||| |
Sbjct: 110 acaatgtggtgctacagtaaatatttgctaatgacgaattaattaggcttaataaattcg 169
Query: 192 tctcgcggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatactt 251
||||| |||| | | |||||||||||||| |||| ||| ||| |||||||||||||||
Sbjct: 170 actcgcagttttctggcggaatctgtaatttattttgttattagactatgtttaatactt 229
Query: 252 taaatgtgtgtccgtatattc 272
|||||||||||||||||||||
Sbjct: 230 taaatgtgtgtccgtatattc 250
>42371_osa-MIR2124b:mirbase
Length = 239
Score = 131 bits (66), Expect = 3e-31
Identities = 110/124 (88%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 14 tttggacacatgcatggagtattaaatataat---aaaaataactaattacacagattgt 70
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4 tttggacacatgcatggagtattaaatatagacgaaaaaataactaattacacagattgc 63
Query: 71 gtgtaaattacgagatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgc 130
||||||||| ||||| ||||||||||| |||||||| | |||||||||||| ||||||
Sbjct: 64 gtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgc 123
Query: 131 taca 134
||||
Sbjct: 124 taca 127
>42372_osa-MIR2124c:mirbase
Length = 248
Score = 121 bits (61), Expect = 3e-28
Identities = 121/141 (85%)
Strand = Plus / Plus
Query: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttg 191
|||| |||||| ||||||||| || |||||| || |||||||||||||||||||||| |
Sbjct: 108 acaacgtggtggtacagtaaatatttgctaatgatagattaattaggcttaataaattcg 167
Query: 192 tctcgcggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatactt 251
||||| |||| | | |||||||||||||| |||| ||| ||| | | |||||||||||
Sbjct: 168 tctcgtagttttctggcggaatctgtaatttattttgttattagacaacgtttaatactt 227
Query: 252 taaatgtgtgtccgtatattc 272
|||||||||||||||||||||
Sbjct: 228 taaatgtgtgtccgtatattc 248
>42375_osa-MIR2124f:mirbase
Length = 252
Score = 109 bits (55), Expect = 1e-24
Identities = 115/135 (85%)
Strand = Plus / Plus
Query: 138 tggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttgtctcgc 197
||||| |||||||||| | |||||| || |||||||||| ||||| ||||| |||||
Sbjct: 118 tggtgttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtctctt 177
Query: 198 ggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatactttaaatg 257
|||||||| | ||| ||| |||||||||| ||| ||| ||| |||||||||||||||||
Sbjct: 178 ggtttacaggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatg 237
Query: 258 tgtgtccgtatattc 272
|||||||||||||||
Sbjct: 238 tgtgtccgtatattc 252
>42092_osa-MIR445a:mirbase
Length = 268
Score = 52.0 bits (26), Expect = 2e-07
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttg 191
|||||||| ||||||||||||| | | ||| | ||||||||||||||||| ||||| |
Sbjct: 147 acaatgtgatgctacagtaaacttttcataattatggattaattaggcttaaaaaattcg 88
Query: 192 tctcgc 197
||||||
Sbjct: 87 tctcgc 82
Score = 44.1 bits (22), Expect = 6e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 81 cgagatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgctaca 134
||||| ||||||||| || |||||| | | ||||||||||||||| |||||||
Sbjct: 185 cgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctaca 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 61 aattagtttttttattagtctatgtttaatact 29
>42095_osa-MIR445d:mirbase
Length = 312
Score = 50.1 bits (25), Expect = 9e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 135 atgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttgtct 194
||||| ||||||| ||||||| || ||| | ||||||||||||||||| || |||||||
Sbjct: 145 atgtgatgctacactaaacatgtgttaattatggattaattaggcttaaaaattttgtct 204
Query: 195 c 195
|
Sbjct: 205 c 205
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 233 tagtctatgtttaatacttt 252
||||||||||||||||||||
Sbjct: 67 tagtctatgtttaatacttt 48
>42099_osa-MIR445h:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgc 197
||||||||||||||||| ||||| |||||||
Sbjct: 125 ggattaattaggcttaaaaaattcgtctcgc 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 74 aattagtttttttattagtctatgtttaatact 42
>42098_osa-MIR445g:mirbase
Length = 275
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgc 197
||||||||||||||||| ||||| |||||||
Sbjct: 124 ggattaattaggcttaaaaaattcgtctcgc 94
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 73 aattagtttttttattagtctatgtttaatact 41
>42096_osa-MIR445e:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgc 197
||||||||||||||||| ||||| |||||||
Sbjct: 119 ggattaattaggcttaaaaaattcgtctcgc 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 68 aattagtttttttattagtctatgtttaatact 36
>42094_osa-MIR445c:mirbase
Length = 260
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgc 197
||||||||||||||||| ||||| |||||||
Sbjct: 117 ggattaattaggcttaaaaaattcgtctcgc 87
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 80 acgagatgaatcttttaagcctaatt 105
|||||| |||||||||||||||||||
Sbjct: 174 acgagacgaatcttttaagcctaatt 149
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 66 aattagtttttttattagtctatgtttaatact 34
>42100_osa-MIR445i:mirbase
Length = 244
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 223 gttttattactagtctatgtttaatactttaaat 256
||||||| | |||| |||||||||||||||||||
Sbjct: 174 gttttataattagtgtatgtttaatactttaaat 207
>42097_osa-MIR445f:mirbase
Length = 305
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 89 aattagtttttttattagtctatgtttaatact 57
>42093_osa-MIR445b:mirbase
Length = 264
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 233 tagtctatgtttaatactttaaat 256
|||||||||||||||||| |||||
Sbjct: 53 tagtctatgtttaatactctaaat 30
