miRNEST 2.0, an integrative microRNA resource :: BLAST
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 359 bits (181), Expect = e-100
Identities = 205/213 (96%)
Strand = Plus / Plus
Query: 2 gaagacgacgacgaagaagaagatggcgaagaaaagtgatcgaagagctcccttcgatcc 61
||||| |||||||| || ||||| |||||||||||| || | ||||||||||||||||||
Sbjct: 17 gaagaagacgacgacgatgaagaaggcgaagaaaagcgaacaaagagctcccttcgatcc 76
Query: 62 aatccaggaggggaagtggtcggttgcagctgccggttcatggatgcctctctggtgcag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aatccaggaggggaagtggtcggttgcagctgccggttcatggatgcctctctggtgcag 136
Query: 122 caatgactaatgctcacctgcacttgcatgggtgtgcatgacccgggagatgaacccacc 181
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 caatgactgatgctcacctgcacttgcatgggtgtgcatgacccgggagatgaacccacc 196
Query: 182 atcatctttccctcgtgcttggattgaagggag 214
|||||||||||||||||||||||||||||||||
Sbjct: 197 atcatctttccctcgtgcttggattgaagggag 229
>42692_zma-MIR159c:mirbase
Length = 217
Score = 278 bits (140), Expect = 2e-75
Identities = 176/187 (94%), Gaps = 2/187 (1%)
Strand = Plus / Plus
Query: 30 aagaaaagtgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgca 89
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 aagaaaggcgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgca 66
Query: 90 gctgccggttcatggatgcctctctggtgcagcaatgactaatgctcac--ctgcacttg 147
||||||||||||||||| ||||||||||||||||||| | ||||||| |||||||||
Sbjct: 67 gctgccggttcatggatacctctctggtgcagcaatggccgctgctcacctctgcacttg 126
Query: 148 catgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgtgcttggattg 207
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 127 catgggtgtgcatgacccgggagatgagcccgccatcatctttccctcgtgcttggattg 186
Query: 208 aagggag 214
|||||||
Sbjct: 187 aagggag 193
>42693_zma-MIR159d:mirbase
Length = 217
Score = 268 bits (135), Expect = 2e-72
Identities = 168/178 (94%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 39 gatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggt 98
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 16 gatcgaagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggt 75
Query: 99 tcatggatgcctctctggtgcagcaatgac--taatgctcacctgcacttgcatgggtgt 156
|||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 76 tcatggatacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgt 135
Query: 157 gcatgacccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 214
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 136 gcatgacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggag 193
>41730_bdi-MIR159:mirbase
Length = 234
Score = 155 bits (78), Expect = 2e-38
Identities = 153/174 (87%), Gaps = 3/174 (1%)
Strand = Plus / Plus
Query: 43 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 102
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 27 gaagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcat 86
Query: 103 ggatgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcat 160
|||| ||| ||||||||| ||| || |||| | | |||| ||||| ||| |||||
Sbjct: 87 ggatacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcat 145
Query: 161 gacccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 214
||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 146 gacccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggag 199
>41922_osa-MIR159f:mirbase
Length = 188
Score = 125 bits (63), Expect = 2e-29
Identities = 143/169 (84%), Gaps = 8/169 (4%)
Strand = Plus / Plus
Query: 46 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 105
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 106 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 165
| ||||| |||| ||| | | ||| ||||||||||||||| ||||||||||
Sbjct: 73 tacctctgcagtgc----atgtcgtaggct----tgcacttgcatgggtttgcatgaccc 124
Query: 166 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 214
|||||||||||||||||| |||| | || ||||||||||||||||||
Sbjct: 125 gggagatgaacccaccattgtcttcctcttatgcttggattgaagggag 173
>41919_osa-MIR159c:mirbase
Length = 197
Score = 91.7 bits (46), Expect = 2e-19
Identities = 140/170 (82%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 46 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 105
||||||| ||||||||||| |||||| ||||||||| || ||||||||||| ||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatgga 72
Query: 106 tgcctctctggtgca-gcaatgactaatgctcacctgcacttgcatgggtgtgcatgacc 164
| ||||| ||||| | | | | || ||||||||||||||||| |||||||||
Sbjct: 73 tacctctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgcatgacc 132
Query: 165 cgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 214
||||||||||||||||||| |||| | || || |||||||||||||||
Sbjct: 133 cgggagatgaacccaccattgtcttcctctattgattggattgaagggag 182
>41921_osa-MIR159e:mirbase
Length = 191
Score = 85.7 bits (43), Expect = 1e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 43 gaagagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttca 101
||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||||||||
Sbjct: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
Query: 102 tggatgcctct 112
||||| |||||
Sbjct: 70 tggatacctct 80
>41920_osa-MIR159d:mirbase
Length = 189
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 46 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 105
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 106 tgcctct 112
| |||||
Sbjct: 73 tacctct 79
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 138 cctgcacttgcatgggtgtgcatgacccgggagatgaacc 177
||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 98 cctgcacttgcatgggtttgcatgacctgggagatgaacc 137
