miRNEST 2.0, an integrative microRNA resource :: BLAST
>42454_sof-MIR159c:mirbase
Length = 238
Score = 329 bits (166), Expect = 6e-91
Identities = 169/170 (99%)
Strand = Plus / Plus
Query: 63 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatg 107
Query: 123 cctctctggtgcagcaatgactgatgctcacctgcacttgcatgggtgtgcatgacccgg 182
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 108 cctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgacccgg 167
Query: 183 gagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 217
>42692_zma-MIR159c:mirbase
Length = 217
Score = 272 bits (137), Expect = 1e-73
Identities = 164/172 (95%), Gaps = 2/172 (1%)
Strand = Plus / Plus
Query: 63 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatg 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggata 84
Query: 123 cctctctggtgcagcaatgactgatgctcac--ctgcacttgcatgggtgtgcatgaccc 180
||||||||||||||||||| | | ||||||| |||||||||||||||||||||||||||
Sbjct: 85 cctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatgaccc 144
Query: 181 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctc 196
>42693_zma-MIR159d:mirbase
Length = 217
Score = 264 bits (133), Expect = 3e-71
Identities = 163/172 (94%), Gaps = 2/172 (1%)
Strand = Plus / Plus
Query: 63 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatg 122
|||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 25 gctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatggata 84
Query: 123 cctctctggtgcagcaatgactga--tgctcacctgcacttgcatgggtgtgcatgaccc 180
||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 85 cctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgaccc 144
Query: 181 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
|||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
>41730_bdi-MIR159:mirbase
Length = 234
Score = 157 bits (79), Expect = 5e-39
Identities = 152/173 (87%), Gaps = 5/173 (2%)
Strand = Plus / Plus
Query: 63 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatg 122
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 32 gctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatggata 91
Query: 123 cctctctggtgca-gcaatgactgatgctcacct--gcacttgcatgggtgtgcatgacc 179
||| ||||||||| ||| || || | | ||| |||| ||||| ||| |||||||||
Sbjct: 92 cctgtctggtgcatgcagtg--tggtaatagcctgcgcacctgcatcggtttgcatgacc 149
Query: 180 cgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
||||||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 150 cgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggagctc 202
>41922_osa-MIR159f:mirbase
Length = 188
Score = 127 bits (64), Expect = 4e-30
Identities = 144/170 (84%), Gaps = 8/170 (4%)
Strand = Plus / Plus
Query: 63 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatg 122
|||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 15 gctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatggata 74
Query: 123 cctctctggtgcagcaatgactgatgctcacctgcacttgcatgggtgtgcatgacccgg 182
||||| ||||| || | | ||| ||||||||||||||| ||||||||||||
Sbjct: 75 cctctgcagtgca----tgtcgtaggct----tgcacttgcatgggtttgcatgacccgg 126
Query: 183 gagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
|||||||||||||||| |||| | || |||||||||||||||||||||
Sbjct: 127 gagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
>41919_osa-MIR159c:mirbase
Length = 197
Score = 101 bits (51), Expect = 3e-22
Identities = 142/171 (83%), Gaps = 1/171 (0%)
Strand = Plus / Plus
Query: 63 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatg 122
||||| ||||||||||| |||||| ||||||||| || ||||||||||| |||||||||
Sbjct: 15 gctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatggata 74
Query: 123 cctctctggtgca-gcaatgactgatgctcacctgcacttgcatgggtgtgcatgacccg 181
||||| ||||| | | | || || ||||||||||||||||| |||||||||||
Sbjct: 75 cctctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgcatgacccg 134
Query: 182 ggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
||||||||||||||||| |||| | || || ||||||||||||||||||
Sbjct: 135 ggagatgaacccaccattgtcttcctctattgattggattgaagggagctc 185
>41920_osa-MIR159d:mirbase
Length = 189
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 63 gctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatg 122
||||| ||||||||||| |||||| ||||||||| || |||||||||||||||||||||
Sbjct: 15 gctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatggata 74
Query: 123 cctct 127
|||||
Sbjct: 75 cctct 79
Score = 63.9 bits (32), Expect = 6e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 153 cctgcacttgcatgggtgtgcatgacccgggagatgaacc 192
||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 98 cctgcacttgcatgggtttgcatgacctgggagatgaacc 137
>41921_osa-MIR159e:mirbase
Length = 191
Score = 77.8 bits (39), Expect = 4e-15
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 69 ttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatggatgcctct 127
||||||||||| |||||| ||||||||| || ||||||||||||||||||||| |||||
Sbjct: 22 ttcgatccaattcaggagaggaagtggtaggatgcagctgccggttcatggatacctct 80
