miRNEST 2.0, an integrative microRNA resource :: BLAST
>42775_zma-MIR172a:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 4e-09
Identities = 73/88 (82%), Gaps = 8/88 (9%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcacaacccatggatccaaataaaccactgatttggatcgaggag 60
|||||||||||||||||||||||||| |||| || ||||||||||||| |
Sbjct: 4 tggcatcatcaagattcacaacccatcaatccgaa----ccactgatttggaatgc---- 55
Query: 61 atgcatgagaatcttgatgatgctgcat 88
||| ||||||||||||||||||||||||
Sbjct: 56 atgyatgagaatcttgatgatgctgcat 83
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 gcatgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||||
Sbjct: 115 gcatgagaatcttgatgatgctgcat 140
>42778_zma-MIR172d:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 51 atgagaatcttgatgatgctgcat 74
>42777_zma-MIR172c:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 100 atgagaatcttgatgatgctgcat 123
>42776_zma-MIR172b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 103 atgagaatcttgatgatgctgcat 126
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcat 119
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcat 102
>41993_osa-MIR172d:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 88 atgagaatcttgatgatgctgcat 111
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcat 119
>41725_ata-MIR172:mirbase
Length = 277
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 206 atgagaatcttgatgatgctgcat 229
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 76 atgagaatcttgatgatgctgcat 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcat 9
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 32 atgagaatcttgatgatgctgcat 9
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgcat 118
>40324_bra-MIR172b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcat 102
>40323_bra-MIR172a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 84 atgagaatcttgatgatgctgcat 107
>40307_bol-MIR172b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcat 102
>40306_bol-MIR172a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 84 atgagaatcttgatgatgctgcat 107
>40064_ath-MIR172b:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 68 atgagaatcttgatgatgctgcat 91
>40063_ath-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 75 atgagaatcttgatgatgctgcat 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcaca 20
||||||||||||||||||||
Sbjct: 6 tggcatcatcaagattcaca 25
>39853_aly-MIR172b:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 90 atgagaatcttgatgatgctgcat 113
>39852_aly-MIR172a:mirbase
Length = 149
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcat 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcaca 20
||||||||||||||||||||
Sbjct: 27 tggcatcatcaagattcaca 46
>41990_osa-MIR172a:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 77 tgagaatcttgatgatgctgcat 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcaca 20
||||||||||||||||||||
Sbjct: 14 tggcatcatcaagattcaca 33
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 31 tgagaatcttgatgatgctgcat 9
>41543_sly-MIR172b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgcat 135
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 130 tgagaatcttgatgatgctgcat 152
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 97 tgagaatcttgatgatgctgcat 119
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 109 tgagaatcttgatgatgctgcat 131
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 98 tgagaatcttgatgatgctgcat 120
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 147 tgagaatcttgatgatgctgcat 169
>40463_gma-MIR172f:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 107 tgagaatcttgatgatgctgcat 129
>40459_gma-MIR172b:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 112 tgagaatcttgatgatgctgcat 134
>40458_gma-MIR172a:mirbase
Length = 159
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgcat 88
|||||||||||||||||||||||
Sbjct: 118 tgagaatcttgatgatgctgcat 140
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgca 87
|||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgca 117
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgca 87
|||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgca 117
>41542_sly-MIR172a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 gagaatcttgatgatgctgcat 88
||||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgcat 106
>41233_csi-MIR172a:mirbase
Length = 162
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgca 87
||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgca 134
>40066_ath-MIR172d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgca 87
||||||||||||||||||||||
Sbjct: 86 tgagaatcttgatgatgctgca 107
>39855_aly-MIR172d:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgca 87
||||||||||||||||||||||
Sbjct: 110 tgagaatcttgatgatgctgca 131
>42779_zma-MIR172e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcaca 20
||||||||||||||||||||
Sbjct: 24 tggcatcatcaagattcaca 43
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 136 gaatcttgatgatgctgcat 155
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcaca 20
||||||||||||||||||||
Sbjct: 4 tggcatcatcaagattcaca 23
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 151 gaatcttgatgatgctgcat 170
>41991_osa-MIR172b:mirbase
Length = 238
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcaca 20
||||||||||||||||||||
Sbjct: 14 tggcatcatcaagattcaca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 209 gaatcttgatgatgctgcat 228
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcaca 20
||||||||||||||||||||
Sbjct: 32 tggcatcatcaagattcaca 51
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 205 gaatcttgatgatgctgcat 224
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 105 gaatcttgatgatgctgcat 124
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 ggcatcatcaagattcacaa 21
||||||||||||||||||||
Sbjct: 15 ggcatcatcaagattcacaa 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 154 gaatcttgatgatgctgcat 173
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 87 gaatcttgatgatgctgcat 106
>41127_tcc-MIR172d:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggcatcatcaagattcaca 20
||||||||||||||||||||
Sbjct: 24 tggcatcatcaagattcaca 43
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 ggcatcatcaagattcacaa 21
||||||||||||||||||||
Sbjct: 25 ggcatcatcaagattcacaa 44
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 124 gaatcttgatgatgctgcat 143
>40067_ath-MIR172e:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 96 gaatcttgatgatgctgcat 115
>39856_aly-MIR172e:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gaatcttgatgatgctgcat 88
||||||||||||||||||||
Sbjct: 99 gaatcttgatgatgctgcat 118
