miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42819_zma-MIR399a:mirbase
          Length = 123

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 8  agggtaagaatcacagtgcggttctcctctggca 41
          ||||| ||||||||||||||||||||||||||||
Sbjct: 8  agggtgagaatcacagtgcggttctcctctggca 41



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||||||||
Sbjct: 84  tgccaaaggagaattgccctgccattc 110




>42049_osa-MIR399i:mirbase
          Length = 116

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 14 agaatcacagtgcggttctcctctggcatggagg 47
          ||||||||||||| ||||||||||||||||||||
Sbjct: 4  agaatcacagtgcagttctcctctggcatggagg 37



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 89  tccctgccaaaggagaattgccctgccattc 119
           ||||||||||||||||  |||||||||||||
Sbjct: 82  tccctgccaaaggagagctgccctgccattc 112




>41803_bdi-MIR399b:mirbase
          Length = 160

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 8  agggtaagaatcacagtgcggttctcctctggcatggagg 47
          ||||| ||||| |||||||||||||||||||||| |||||
Sbjct: 16 agggtgagaattacagtgcggttctcctctggcacggagg 55



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||||||||
Sbjct: 110 tgccaaaggagaattgccctgccattc 136




>41802_bdi-MIR399:mirbase
          Length = 100

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 21  cagtgcggttctcctctggcatggaggccaacatagcaggcattggagaatgcacagcgc 80
           |||||| |||||||||||||||||| || ||  ||||||||  || | |||| ||   ||
Sbjct: 1   cagtgcagttctcctctggcatggatgctaatgtagcaggccctgcacaatggactatgc 60

                                               
Query: 81  tatcgccatccctgccaaaggagaattgccctgcca 116
           |||| |  ||||||||||||||||||| ||||||||
Sbjct: 61  tatcactgtccctgccaaaggagaattaccctgcca 96




>41675_vvi-MIR399h:mirbase
          Length = 90

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 93  tgccaaaggagaattgccctgccattcg 120
           ||||||||||||||||||||||||||||
Sbjct: 60  tgccaaaggagaattgccctgccattcg 87




>41454_ptc-MIR399g:mirbase
          Length = 94

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 92  ctgccaaaggagaattgccctgccattc 119
           ||||||||||||||||||||||||||||
Sbjct: 64  ctgccaaaggagaattgccctgccattc 91




>41453_ptc-MIR399f:mirbase
          Length = 101

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 93  tgccaaaggagaattgccctgccattcg 120
           ||||||||||||||||||||||||||||
Sbjct: 72  tgccaaaggagaattgccctgccattcg 99




>42590_sbi-MIR399b:mirbase
          Length = 121

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                     
Query: 6  tcagggtaagaatcacagtgcggttctcctctggcatggaggc 48
          ||||||| ||||||||||||| | |||||||||||||| ||||
Sbjct: 5  tcagggtgagaatcacagtgcagctctcctctggcatgaaggc 47



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 89  tccctgccaaaggagaattgccctgccattc 119
           ||||||||||||||||  |||||||||||||
Sbjct: 78  tccctgccaaaggagagctgccctgccattc 108




>42042_osa-MIR399b:mirbase
          Length = 97

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 14 agaatcacagtgcggttctcctctggcatgg 44
          |||||||||||||| ||||||||||||||||
Sbjct: 4  agaatcacagtgcgattctcctctggcatgg 34



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||||||||
Sbjct: 67  tgccaaaggagaattgccctgccattc 93




>41250_csi-MIR399e:mirbase
          Length = 154

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||||||||
Sbjct: 18  tgccaaaggagaattgccctgccattc 44




>41248_csi-MIR399c:mirbase
          Length = 149

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||||||||
Sbjct: 109 tgccaaaggagaattgccctgccattc 135




>41152_tcc-MIR399g:mirbase
          Length = 112

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||||||||
Sbjct: 72  tgccaaaggagaattgccctgccattc 98




>41150_tcc-MIR399e:mirbase
          Length = 117

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 94  gccaaaggagaattgccctgccattc 119
           ||||||||||||||||||||||||||
Sbjct: 78  gccaaaggagaattgccctgccattc 103




>42589_sbi-MIR399a:mirbase
          Length = 136

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 93  tgccaaaggagaattgccctgccattcg 120
           |||||||||||||||||||||| |||||
Sbjct: 97  tgccaaaggagaattgccctgcgattcg 124




>42822_zma-MIR399d:mirbase
          Length = 125

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 14 agaatcacagtgcggttctcctctggcatggaggc 48
          |||||||||||| || |||||||||||||| ||||
Sbjct: 9  agaatcacagtgtggctctcctctggcatgaaggc 43



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 93  tgccaaaggagaattgccctgccattcg 120
           ||||||||||||  ||||||||||||||
Sbjct: 86  tgccaaaggagagctgccctgccattcg 113




>42821_zma-MIR399c:mirbase
          Length = 207

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||| ||||
Sbjct: 168 tgccaaaggagaattgccctgcgattc 194




>42820_zma-MIR399b:mirbase
          Length = 122

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                     
Query: 6  tcagggtaagaatcacagtgcggttctcctctggcatggaggc 48
          |||||||  |||||||||||| | |||||||||||||| ||||
Sbjct: 6  tcagggtgcgaatcacagtgcagctctcctctggcatgaaggc 48




>42598_sbi-MIR399j:mirbase
          Length = 93

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 93  tgccaaaggagaattgccctgcc 115
           |||||||||||||||||||||||
Sbjct: 71  tgccaaaggagaattgccctgcc 93



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 agtgcggttctcctctggcatg 43
          ||||||||||||||||||||||
Sbjct: 1  agtgcggttctcctctggcatg 22




>42591_sbi-MIR399c:mirbase
          Length = 130

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||| ||||
Sbjct: 91  tgccaaaggagaattgccctgcgattc 117




>42043_osa-MIR399c:mirbase
          Length = 110

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||||||||||||| ||||
Sbjct: 80  tgccaaaggagaattgccctgcgattc 106




>41063_ghr-MIR399d:mirbase
          Length = 98

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 93  tgccaaaggagaattgccctgccattc 119
           |||||||||||| ||||||||||||||
Sbjct: 67  tgccaaaggagatttgccctgccattc 93




>42826_zma-MIR399h:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 93  tgccaaaggagaattgccctgc 114
           ||||||||||||||||||||||
Sbjct: 73  tgccaaaggagaattgccctgc 94




>42041_osa-MIR399a:mirbase
          Length = 149

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 93  tgccaaaggagaattgccctgc 114
           ||||||||||||||||||||||
Sbjct: 119 tgccaaaggagaattgccctgc 140




>41668_vvi-MIR399a:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 92  ctgccaaaggagaattgccctg 113
           ||||||||||||||||||||||
Sbjct: 66  ctgccaaaggagaattgccctg 87




>40739_mtr-MIR399i:mirbase
          Length = 90

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 93  tgccaaaggagaattgccctgccatt 118
           |||||||||||| |||||||||||||
Sbjct: 65  tgccaaaggagatttgccctgccatt 90




>40738_mtr-MIR399h:mirbase
          Length = 90

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 93  tgccaaaggagaattgccctgccatt 118
           |||||||||||| |||||||||||||
Sbjct: 65  tgccaaaggagatttgccctgccatt 90




>40733_mtr-MIR399c:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 93  tgccaaaggagaattgccctgccatt 118
           |||||||||||| |||||||||||||
Sbjct: 80  tgccaaaggagatttgccctgccatt 105




>42828_zma-MIR399j:mirbase
          Length = 175

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 91  cctgccaaaggagaattgccctgc 114
           |||||||||||||| |||||||||
Sbjct: 152 cctgccaaaggagagttgccctgc 175




>42592_sbi-MIR399d:mirbase
          Length = 205

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 91  cctgccaaaggagaattgccctgc 114
           |||||||||||||| |||||||||
Sbjct: 164 cctgccaaaggagagttgccctgc 187




>42044_osa-MIR399d:mirbase
          Length = 286

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 91  cctgccaaaggagaattgccctgc 114
           |||||||||||||| |||||||||
Sbjct: 254 cctgccaaaggagagttgccctgc 277