miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42607_sbi-MIR437g:mirbase
          Length = 176

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 87/101 (86%), Gaps = 2/101 (1%)
 Strand = Plus / Minus

                                                                       
Query: 19  accaagtttatagaaaaatgcatcaacatttccaacatcaaattagtatcattaaattct 78
           ||||||||||||||||| ||||||||||| | |||||||||| |||| |||  |||||||
Sbjct: 152 accaagtttatagaaaattgcatcaacatctacaacatcaaactagtttcaccaaattct 93

                                                    
Query: 79  ccgtgaaata--tattcatagtgcatttacttgaacttgta 117
           |  |||||||  | || |||||||||||| |||||||||||
Sbjct: 92  ctatgaaatatgtcttgatagtgcatttatttgaacttgta 52



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||| |||||||||||||||||||||
Sbjct: 144 aaacttggtcaaagttagagaagtttgactt 174




>42631_sbi-MIR1435a:mirbase
          Length = 287

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 19  accaagtttatagaaaaatgcatcaacatttccaacatcaaattagtatcattaaattct 78
           |||||||||| ||||| |||||||||||| | ||||||||| || || ||||||||| ||
Sbjct: 222 accaagtttacagaaagatgcatcaacatctacaacatcaagtttgtttcattaaatcct 163

                      
Query: 79  ccgtgaaatat 89
           || ||||||||
Sbjct: 162 ccatgaaatat 152




>42475_ssp-MIR437a:mirbase
          Length = 175

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 87/102 (85%), Gaps = 3/102 (2%)
 Strand = Plus / Plus

                                                                       
Query: 21  caagtttatagaaaaatgcatcaacatttccaacatcaaattagtatcattaaattctcc 80
           |||||||||||||||||||| ||| || |  || |||||| ||||  |||||||||||||
Sbjct: 25  caagtttatagaaaaatgcaccaaaatctagaatatcaaactagttccattaaattctcc 84

                                                     
Query: 81  gtgaaatata--ttcatagtgcatttacttgaacttgtagat 120
            |||||||||  || ||| |||||||| ||||||||||||||
Sbjct: 85  atgaaatatattttgataatgcattta-ttgaacttgtagat 125




>42620_sbi-MIR437u:mirbase
          Length = 164

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           |||||||||||||||||||||||||||||||
Sbjct: 134 aaacttggtgaaagttagagaagtttgactt 164



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 19  accaagtttatagaaaaatgcatcaacatttccaacatcaaattagtatcattaaattct 78
           ||||||||||||||||||| |  ||| || |   ||||||||||||| ||||||||||||
Sbjct: 142 accaagtttatagaaaaatacgccaatatctatgacatcaaattagtttcattaaattct 83

             
Query: 79  cc 80
           ||
Sbjct: 82  cc 81




>42610_sbi-MIR437k:mirbase
          Length = 172

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 139 ctaaaaacttggtgaaagttagagaagtttgactt 173
           ||||||||||||| |||||||||||||||||||||
Sbjct: 136 ctaaaaacttggtcaaagttagagaagtttgactt 170



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 147 ttggtgaaagttagagaagtttgac 171
           ||||| |||||||||||||||||||
Sbjct: 27  ttggtcaaagttagagaagtttgac 3




>42614_sbi-MIR437o:mirbase
          Length = 175

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                      
Query: 24 gtttatagaaaaatgcatcaacatttccaacatcaaattagtatcattaaattctccgtg 83
          |||| |||||||||||| || | | | ||||||||||||||| |||||||||||||  ||
Sbjct: 25 gtttttagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatg 84

                
Query: 84 aaatat 89
          ||||||
Sbjct: 85 aaatat 90



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 140 taaaaacttggtgaaagttagagaagtttgactt 173
           ||||||||| || |||||||||||||||||||||
Sbjct: 140 taaaaacttagtcaaagttagagaagtttgactt 173




>42621_sbi-MIR437v:mirbase
          Length = 114

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                   
Query: 20 ccaagtttatagaaaaatgcatcaacatttccaacatcaaa 60
          |||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 91 ccaagtttatagaaaaatgcatcaacatctacaatatcaaa 51



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||  |||||||||||||||||||||
Sbjct: 84  aaacttggacaaagttagagaagtttgactt 114




>42602_sbi-MIR437b:mirbase
          Length = 171

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 19  accaagtttatagaaaaatgcatcaacatttccaacatcaaatta 63
           |||||||||||||||||||||| |||||| |  ||||||||||||
Sbjct: 149 accaagtttatagaaaaatgcaccaacatctgaaacatcaaatta 105



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||| |||||||||||||||||||||
Sbjct: 141 aaacttggtcaaagttagagaagtttgactt 171




>42605_sbi-MIR437e:mirbase
          Length = 101

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 142 aaaacttggtgaaagttagagaagtttgactt 173
           |||||||||| |||||||||||||||||||||
Sbjct: 70  aaaacttggtcaaagttagagaagtttgactt 101




>42619_sbi-MIR437t:mirbase
          Length = 170

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||| |||||||||||||||||||||
Sbjct: 140 aaacttggtcaaagttagagaagtttgactt 170



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 19  accaagtttatagaaaaatgca 40
           ||||||||||||||||||||||
Sbjct: 148 accaagtttatagaaaaatgca 127




>42615_sbi-MIR437p:mirbase
          Length = 188

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||| |||||||||||||||||||||
Sbjct: 156 aaacttggtcaaagttagagaagtttgactt 186




>42613_sbi-MIR437n:mirbase
          Length = 182

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||| |||||||||||||||||||||
Sbjct: 150 aaacttggttaaagttagagaagtttgactt 180




>42611_sbi-MIR437l:mirbase
          Length = 170

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 139 ctaaaaacttggtgaaagttagagaagtttgactt 173
           ||||||||||||  |||||||||||||||||||||
Sbjct: 136 ctaaaaacttggccaaagttagagaagtttgactt 170



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 19 accaagtttatagaaaaatgcatcaaca 46
          ||||| |||||||||||||||| |||||
Sbjct: 21 accaaatttatagaaaaatgcaccaaca 48




>42606_sbi-MIR437f:mirbase
          Length = 174

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||| |||||||||||||||||||||
Sbjct: 142 aaacttggtcaaagttagagaagtttgactt 172



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 49/57 (85%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 19  accaagtttatagaaaaatgcatcaacatttccaacatcaaattagtatcattaaat 75
           ||||||||||||||||| |||| ||| ||   ||||| ||||||||| |||||||||
Sbjct: 150 accaagtttatagaaaagtgcaccaagat---caacaacaaattagtttcattaaat 97



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 aaagttagagaagtttgact 172
           ||||||||||||||||||||
Sbjct: 20  aaagttagagaagtttgact 1




>42604_sbi-MIR437d:mirbase
          Length = 136

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||| |||||||||||||||||||||
Sbjct: 104 aaacttggttaaagttagagaagtttgactt 134



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 19  accaagtttatagaaaaatgcatcaacatttccaacatcaaattag 64
           ||||||||||||| |||||||| ||| |||| |||||||| |||||
Sbjct: 112 accaagtttataggaaaatgcaccaatatttacaacatcacattag 67




>42477_ssp-MIR437c:mirbase
          Length = 177

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 88/106 (83%), Gaps = 3/106 (2%)
 Strand = Plus / Plus

                                                                       
Query: 25  tttatagaaaaatgcatcaacatttccaacatcaaatt-agtatcattaaattctccgtg 83
           ||||| |||||||| |||||||| | ||| ||||| || | | |||| ||||||||| ||
Sbjct: 30  tttatggaaaaatgtatcaacatctacaatatcaattttattttcataaaattctccatg 89

                                                         
Query: 84  aaatatat--tcatagtgcatttacttgaacttgtagattttaata 127
           |||||| |  | |||||||||||| | |||||||||||| ||||||
Sbjct: 90  aaatatttcttaatagtgcatttattcgaacttgtagatgttaata 135




>42063_osa-MIR437:mirbase
          Length = 213

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||| |||||||||||||||||||||
Sbjct: 145 aaacttggtcaaagttagagaagtttgactt 175




>42609_sbi-MIR437j:mirbase
          Length = 172

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 143 aaacttggtgaaagttagagaagtttgac 171
           ||||||||| |||||||||||||||||||
Sbjct: 29  aaacttggtcaaagttagagaagtttgac 1



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 141 aaaaacttggtgaaagttagagaagtttgactt 173
           |||||| |||| |||||||||||||||||||||
Sbjct: 140 aaaaacatggtcaaagttagagaagtttgactt 172




>42617_sbi-MIR437r:mirbase
          Length = 180

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                         
Query: 19 accaagtttatagaaaaatgcatcaacatttccaacatcaaattagt 65
          ||||||| |||||||||||| |  || |||| |||||||||||||||
Sbjct: 22 accaagtctatagaaaaatgtactaatatttacaacatcaaattagt 68



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           ||||||||  |||||||||||||||||||||
Sbjct: 148 aaacttggccaaagttagagaagtttgactt 178




>42616_sbi-MIR437q:mirbase
          Length = 160

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 147 ttggtgaaagttagagaagtttgactt 173
           ||||| |||||||||||||||||||||
Sbjct: 132 ttggtaaaagttagagaagtttgactt 158




>42608_sbi-MIR437i:mirbase
          Length = 170

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 143 aaacttggtgaaagttagagaagtttgactt 173
           |||||| || |||||||||||||||||||||
Sbjct: 140 aaactttgtcaaagttagagaagtttgactt 170



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 143 aaacttggtgaaagttagagaagtttgac 171
           ||||||||| ||||||| |||||||||||
Sbjct: 29  aaacttggtcaaagttaaagaagtttgac 1




>42612_sbi-MIR437m:mirbase
          Length = 174

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 34/37 (91%), Gaps = 2/37 (5%)
 Strand = Plus / Plus

                                                
Query: 139 ctaaaaacttggtgaaa--gttagagaagtttgactt 173
           ||||||||||||| |||  ||||||||||||||||||
Sbjct: 136 ctaaaaacttggtcaaaaagttagagaagtttgactt 172



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                          
Query: 29 tagaaaaatgcatcaacatttccaacatcaaattagtatcattaaatt 76
          |||||||||||| |||||| |  || ||||||||||  ||||||||||
Sbjct: 31 tagaaaaatgcaccaacatctagaatatcaaattagcttcattaaatt 78




>42618_sbi-MIR437s:mirbase
          Length = 176

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 aaagttagagaagtttgactt 173
           |||||||||||||||||||||
Sbjct: 154 aaagttagagaagtttgactt 174




>42603_sbi-MIR437c:mirbase
          Length = 175

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 aaagttagagaagtttgactt 173
           |||||||||||||||||||||
Sbjct: 155 aaagttagagaagtttgactt 175




>42601_sbi-MIR437a:mirbase
          Length = 190

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 aaagttagagaagtttgactt 173
           |||||||||||||||||||||
Sbjct: 168 aaagttagagaagtttgactt 188