miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42481_ssp-MIR528:mirbase
          Length = 92

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 79/92 (85%), Gaps = 10/92 (10%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggaaggggcatgcagaggagcacgaggcttggctggaagccgac----------ctacg 50
          |||||||||||||||||||||||||||||||||||  ||||||||          |||| 
Sbjct: 1  tggaaggggcatgcagaggagcacgaggcttggctaaaagccgacctgtgctatgctacc 60

                                          
Query: 51 cctcgctggctctcctgtgcctgcctcttcca 82
          ||||||||||||||||||||||||||||||||
Sbjct: 61 cctcgctggctctcctgtgcctgcctcttcca 92




>42833_zma-MIR528b:mirbase
          Length = 78

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 1  tggaaggggcatgcagaggagcacga 26
          ||||||||||||||||||||||||||
Sbjct: 2  tggaaggggcatgcagaggagcacga 27



 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 59 gctctcctgtgcctgcctcttccatt 84
          ||||||||||||||||||||||||||
Sbjct: 53 gctctcctgtgcctgcctcttccatt 78




>42832_zma-MIR528a:mirbase
          Length = 123

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 60  ctctcctgtgcctgcctcttccatt 84
           |||||||||||||||||||||||||
Sbjct: 99  ctctcctgtgcctgcctcttccatt 123



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tggaaggggcatgcagaggag 21
          |||||||||||||||||||||
Sbjct: 2  tggaaggggcatgcagaggag 22




>41806_bdi-MIR528:mirbase
          Length = 160

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 61  tctcctgtgcctgcctcttccatt 84
           ||||||||||||||||||||||||
Sbjct: 99  tctcctgtgcctgcctcttccatt 122



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  tggaaggggcatgcagaggagca 23
          |||||||||||||||||||||||
Sbjct: 36 tggaaggggcatgcagaggagca 58




>42102_osa-MIR528:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  tggaaggggcatgcagaggagca 23
          |||||||||||||||||||||||
Sbjct: 3  tggaaggggcatgcagaggagca 25



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 60 ctctcctgtgcctgcctcttccatt 84
          ||||||||||| |||||||||||||
Sbjct: 64 ctctcctgtgcttgcctcttccatt 88