miRNEST 2.0, an integrative microRNA resource :: BLAST
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 295 bits (149), Expect = 6e-81
Identities = 171/177 (96%), Gaps = 1/177 (0%)
Strand = Plus / Plus
Query: 1 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttc 61
Query: 61 atggttcccactatcctatctcca-tagaaaacgaggagagaggcctgtggtttgcatga 119
|||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||
Sbjct: 62 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 121
Query: 120 ccgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgca 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgca 178
>41868_far-MIR159:mirbase
Length = 200
Score = 149 bits (75), Expect = 8e-37
Identities = 155/179 (86%), Gaps = 2/179 (1%)
Strand = Plus / Plus
Query: 1 gtggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgctcgtt 59
||||||||||||||||||||||||| ||||| | | |||| | || ||||||||||||
Sbjct: 14 gtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtacagctgctcgtt 73
Query: 60 catggttcccactatcctatctcc-atagaaaacgaggagagaggcctgtggtttgcatg 118
||||||||||||||||||| |||| | |||| | ||||| |||||||||| | |||||
Sbjct: 74 catggttcccactatcctacctccgtttgaaaccagggagataggcctgtggctagcatg 133
Query: 119 accgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 134 accgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctgcat 192
>41918_osa-MIR159b:mirbase
Length = 188
Score = 101 bits (51), Expect = 2e-22
Identities = 148/177 (83%), Gaps = 5/177 (2%)
Strand = Plus / Plus
Query: 1 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 60
||||||||||| || |||||||||| ||| || | ||||||| | |||||||| ||||
Sbjct: 10 gtggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttc 68
Query: 61 atggttcccactatcctatctccatagaaaacgaggagagaggcctgtggtttgcatgac 120
|||||||||||||| ||||||| |||| ||| ||| | |||| |||||||||||||||
Sbjct: 69 atggttcccactattctatctc-ataggaaaagag---ataggcttgtggtttgcatgac 124
Query: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
| |||||||| || | ||| ||||||| || ||||||||||||||||||||||||
Sbjct: 125 caaggagccgaatcaactccttgctgaccactctttggattgaagggagctctgcat 181
>42690_zma-MIR159a:mirbase
Length = 246
Score = 95.6 bits (48), Expect = 1e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
|||||||||||||||||||||||||||| | |||||| | || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcgttcat 81
Query: 63 ggttcccactatcctatctc 82
||||||||||||||||||||
Sbjct: 82 ggttcccactatcctatctc 101
Score = 83.8 bits (42), Expect = 4e-17
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 156 tggattgaagggagctctgcat 177
||||||||||||||||||||||
Sbjct: 209 tggattgaagggagctctgcat 230
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 87.7 bits (44), Expect = 3e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
|||||||||||||||||||||||||| | | |||||||| || | |||||||||||||
Sbjct: 19 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 77
Query: 63 ggttcccactatcctatctc 82
||||||||||||||||||||
Sbjct: 78 ggttcccactatcctatctc 97
Score = 83.8 bits (42), Expect = 4e-17
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 165 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 224
Query: 156 tggattgaagggagctctgcat 177
||||||||||||||||||||||
Sbjct: 225 tggattgaagggagctctgcat 246
>42455_sof-MIR159d:mirbase
Length = 265
Score = 87.7 bits (44), Expect = 3e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
|||||||||||||||||||||||||| | | |||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 63 ggttcccactatcctatctc 82
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
Score = 71.9 bits (36), Expect = 2e-13
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 106 tgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtttggattgaag 165
|||||||||||||||||| |||| || || |||| |||| ||||| ||||||||||||
Sbjct: 178 tgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctttggattgaag 237
Query: 166 ggagctctgcat 177
||||||||||||
Sbjct: 238 ggagctctgcat 249
>42452_sof-MIR159a:mirbase
Length = 265
Score = 87.7 bits (44), Expect = 3e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
|||||||||||||||||||||||||| | | |||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 63 ggttcccactatcctatctc 82
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
Score = 83.8 bits (42), Expect = 4e-17
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 156 tggattgaagggagctctgcat 177
||||||||||||||||||||||
Sbjct: 228 tggattgaagggagctctgcat 249
>42700_zma-MIR159k:mirbase
Length = 200
Score = 85.7 bits (43), Expect = 1e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 106 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 164
||||||||||||||||||||||| || ||| |||| || ||||||||||||||||||||
Sbjct: 130 tgtggtttgcatgaccgaggagctgcatcgtccccttcgttgaccgctgtttggattgaa 189
Query: 165 gggagctctgc 175
|||||||||||
Sbjct: 190 gggagctctgc 200
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 51 ctgctcgttcatggttcccactatcctatctc 82
|||||||||||||||||||||| ||| |||||
Sbjct: 48 ctgctcgttcatggttcccactgtcccatctc 79
>42699_zma-MIR159j:mirbase
Length = 252
Score = 85.7 bits (43), Expect = 1e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 106 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 164
||||||||||||||||||||||| || ||| |||| || ||||||||||||||||||||
Sbjct: 182 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggattgaa 241
Query: 165 gggagctctgc 175
|||||||||||
Sbjct: 242 gggagctctgc 252
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 48 cagctgctcgttcatggttcccactatcctatctc 82
||||||||||||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>42453_sof-MIR159b:mirbase
Length = 266
Score = 83.8 bits (42), Expect = 4e-17
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 156 tggattgaagggagctctgcat 177
||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcat 250
Score = 79.8 bits (40), Expect = 6e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
|||||||||||||||||||||||||| | | ||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 80
Query: 63 ggttcccactatcctatctc 82
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>42494_sbi-MIR159:mirbase
Length = 226
Score = 81.8 bits (41), Expect = 2e-16
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 146 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 205
Query: 156 tggattgaagggagctctgca 176
|||||||||||||||||||||
Sbjct: 206 tggattgaagggagctctgca 226
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 50 gctgctcgttcatggttcccactatcctatctc 82
|||||||||||||||||||||||||||||||||
Sbjct: 50 gctgctcgttcatggttcccactatcctatctc 82
>42695_zma-MIR159f:mirbase
Length = 215
Score = 79.8 bits (40), Expect = 6e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
||||||||| |||||||||||||||||| | ||||||| || | |||||||||||||
Sbjct: 1 ggagctcctctcattccaatgaagggtccttccgaagggtg-gttccgctgctcgttcat 59
Query: 63 ggttcccactatcctatctc 82
||||||||||||||||||||
Sbjct: 60 ggttcccactatcctatctc 79
Score = 79.8 bits (40), Expect = 6e-16
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
|||| |||| ||||||||||||||||||||||| || ||| ||| |||| ||||| ||
Sbjct: 136 gagataggcttgtggtttgcatgaccgaggagctgcaccgaccccgtgctggccgctctt 195
Query: 156 tggattgaagggagctctgc 175
||||||||||||||||||||
Sbjct: 196 tggattgaagggagctctgc 215
>42456_sof-MIR159e:mirbase
Length = 264
Score = 79.8 bits (40), Expect = 6e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
|||||||||||||||||||||||||| | | ||||||| || | |||||||||||||
Sbjct: 21 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 79
Query: 63 ggttcccactatcctatctc 82
||||||||||||||||||||
Sbjct: 80 ggttcccactatcctatctc 99
Score = 60.0 bits (30), Expect = 6e-10
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
|||| |||| |||||||||||||||||| |||| || || |||| |||| ||||| ||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 156 tggattgaagggagctct 173
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
>42698_zma-MIR159i:mirbase
Length = 252
Score = 77.8 bits (39), Expect = 3e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 106 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 164
||||||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||
Sbjct: 182 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 241
Query: 165 gggagctctgc 175
|||||||||||
Sbjct: 242 gggagctctgc 252
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 48 cagctgctcgttcatggttcccactatcctatctc 82
||||||||||||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>42697_zma-MIR159h:mirbase
Length = 200
Score = 77.8 bits (39), Expect = 3e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 106 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 164
||||||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||
Sbjct: 130 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 189
Query: 165 gggagctctgc 175
|||||||||||
Sbjct: 190 gggagctctgc 200
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 48 cagctgctcgttcatggttcccactatcctatctc 82
||||||||||||||||||||||||| ||| |||||
Sbjct: 45 cagctgctcgttcatggttcccactgtcccatctc 79
>42691_zma-MIR159b:mirbase
Length = 221
Score = 73.8 bits (37), Expect = 4e-14
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 106 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 164
||||||||||||||||||||||| || || |||| || ||||||||||||||||||||
Sbjct: 134 tgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgtttggattgaa 192
Query: 165 gggagctctgcat 177
|||||||||||||
Sbjct: 193 gggagctctgcat 205
>42696_zma-MIR159g:mirbase
Length = 252
Score = 69.9 bits (35), Expect = 6e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 106 tgtggtttgcatgaccgaggagccgcttcgatccc-tcgctgaccgctgtttggattgaa 164
||||||||||||||||||||||| || ||| ||| ||| ||||||||||||||| ||||
Sbjct: 182 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 241
Query: 165 gggagctctgc 175
||||| |||||
Sbjct: 242 gggagttctgc 252
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 48 cagctgctcgttcatggttcccactatcctatctc 82
||||||||||||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 144 ctgaccgctgtttggattgaagggagctctgcat 177
||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaccgctgtttggattgaagggagctctgcat 34
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctgcat 177
||||||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcat 253
>41917_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctgcat 177
||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcat 265
>41916_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctgcat 177
||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcat 265
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tgtttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>40338_rco-MIR159:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tgtttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 153 tgtttggattgaagggagctct 174
>41528_sly-MIR159:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41218_csi-MIR159:mirbase
Length = 216
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctct 205
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctct 171
>40432_gma-MIR159a:mirbase
Length = 214
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194
>40397_ahy-MIR159:mirbase
Length = 197
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>40311_bra-MIR159a:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 gtttggattgaagggagctc 172
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
