miRNEST 2.0, an integrative microRNA resource :: BLAST
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 95.6 bits (48), Expect = 8e-21
Identities = 79/87 (90%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 27 cgcggtattggtgcggttcaatcagagagctggcgccccaggaggc--aaggggttcctc 84
|||||||||||||||||||||||||| ||||||||| || ||| || ||||||||||||
Sbjct: 1 cgcggtattggtgcggttcaatcagaaagctggcgctcc-ggacgcaaaaggggttcctc 59
Query: 85 ccttcgattgagccgtgccaatatcac 111
||| ||||||||||||||||||||||
Sbjct: 60 tctttgattgagccgtgccaatatcac 86
>41983_osa-MIR171c:mirbase
Length = 99
Score = 65.9 bits (33), Expect = 7e-12
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcagagagctggcgccccaggaggcaaggggttcctcccttcga 91
||||||||||||||||||||| |||| | || || | |||| ||||| ||| | ||| ||
Sbjct: 13 tattggtgcggttcaatcagaaagcttgtgctcc-gaaggcgaggggctccactctttga 71
Query: 92 ttgagccgtgccaatatcacg 112
|||||||||||||||||||||
Sbjct: 72 ttgagccgtgccaatatcacg 92
>40061_ath-MIR171b:mirbase
Length = 117
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 87 ttcgattgagccgtgccaatatcacgcggt 116
||||||||||||||||||||||||||||||
Sbjct: 73 ttcgattgagccgtgccaatatcacgcggt 102
>39850_aly-MIR171b:mirbase
Length = 137
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 87 ttcgattgagccgtgccaatatcacgcggt 116
||||||||||||||||||||||||||||||
Sbjct: 84 ttcgattgagccgtgccaatatcacgcggt 113
>42763_zma-MIR171c:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcagagagctggcgccccaggaggcaaggggttcctcccttcga 91
||||||||||||||||||||| |||| |||| ||| || | ||||| ||| | ||| ||
Sbjct: 23 tattggtgcggttcaatcagaaagcttgcgctcca-aagcccaggggctccactctttga 81
Query: 92 ttgagccgtgccaatatcacg 112
||||||||||||||||||||
Sbjct: 82 ctgagccgtgccaatatcacg 102
>42762_zma-MIR171b:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcagagagctggcgccccaggaggcaaggggttcctcccttcga 91
|||||| |||||||||||||| |||| |||| ||||| | ||||| ||| | ||| ||
Sbjct: 6 tattggcgcggttcaatcagaaagcttgcgctccaggcc-cgaggggctccactctttga 64
Query: 92 ttgagccgtgccaatatcacg 112
|||||||||||||||||||||
Sbjct: 65 ttgagccgtgccaatatcacg 85
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcagagagctggcgccccaggaggcaaggggttcctcccttcga 91
|||||| |||||||||||||| |||| |||| ||| || | ||||| ||| | ||| ||
Sbjct: 6 tattggcgcggttcaatcagaaagcttgcgctccaa-agcccaggggctccactctttga 64
Query: 92 ttgagccgtgccaatatcacg 112
|||||||||||||||||||||
Sbjct: 65 ttgagccgtgccaatatcacg 85
>40321_bra-MIR171d:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 87 ttcgattgagccgtgccaatatcacgcg 114
||||||||||||||||||||||||||||
Sbjct: 68 ttcgattgagccgtgccaatatcacgcg 95
>40286_bna-MIR171b:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 87 ttcgattgagccgtgccaatatcacgcg 114
||||||||||||||||||||||||||||
Sbjct: 68 ttcgattgagccgtgccaatatcacgcg 95
>40320_bra-MIR171c:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 87 ttcgattgagccgtgccaatatcacgc 113
|||||||||||||||||||||||||||
Sbjct: 62 ttcgattgagccgtgccaatatcacgc 88
>40319_bra-MIR171b:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 87 ttcgattgagccgtgccaatatcacgc 113
|||||||||||||||||||||||||||
Sbjct: 69 ttcgattgagccgtgccaatatcacgc 95
>40287_bna-MIR171c:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 87 ttcgattgagccgtgccaatatcacgc 113
|||||||||||||||||||||||||||
Sbjct: 62 ttcgattgagccgtgccaatatcacgc 88
>40285_bna-MIR171a:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 87 ttcgattgagccgtgccaatatcacgc 113
|||||||||||||||||||||||||||
Sbjct: 69 ttcgattgagccgtgccaatatcacgc 95
>40062_ath-MIR171c:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacgcg 114
|||||||||||||||||||||||||
Sbjct: 88 gattgagccgtgccaatatcacgcg 112
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcaga 52
|||||||||||||||||||||
Sbjct: 31 tattggtgcggttcaatcaga 51
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 91 gattgagccgtgccaatatcacg 113
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 94 gattgagccgtgccaatatcacg 116
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcacg 93
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 68 gattgagccgtgccaatatcacg 90
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcacg 93
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcacg 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcaga 52
|||||||||||||||||||||
Sbjct: 16 tattggtgcggttcaatcaga 36
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 73 gattgagccgtgccaatatcacg 95
>41216_crt-MIR171:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 162 gattgagccgtgccaatatcacg 184
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 78 gattgagccgtgccaatatcacg 100
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 78 gattgagccgtgccaatatcacg 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcagagagc 56
|||||||||||||||||| ||||||
Sbjct: 23 tattggtgcggttcaatcggagagc 47
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 68 gattgagccgtgccaatatcacg 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcaga 52
|||||||||||||||||||||
Sbjct: 8 tattggtgcggttcaatcaga 28
>40360_rco-MIR171b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcagaga 54
|||||||||||||||||||||||
Sbjct: 9 tattggtgcggttcaatcagaga 31
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 64 gattgagccgtgccaatatcacg 86
>40359_rco-MIR171a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcacg 87
>40318_bra-MIR171a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 63 gattgagccgtgccaatatcacg 85
>40305_bol-MIR171a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 69 gattgagccgtgccaatatcacg 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcaga 52
|||||||||||||||||||||
Sbjct: 12 tattggtgcggttcaatcaga 32
>40289_bna-MIR171e:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 68 gattgagccgtgccaatatcacg 90
>40288_bna-MIR171d:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 69 gattgagccgtgccaatatcacg 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcaga 52
|||||||||||||||||||||
Sbjct: 12 tattggtgcggttcaatcaga 32
>39851_aly-MIR171c:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcacg 112
|||||||||||||||||||||||
Sbjct: 75 gattgagccgtgccaatatcacg 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcaga 52
|||||||||||||||||||||
Sbjct: 18 tattggtgcggttcaatcaga 38
>42769_zma-MIR171i:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 66 gattgagccgtgccaatatcac 87
>42766_zma-MIR171f:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 116 gattgagccgtgccaatatcac 137
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 123 gattgagccgtgccaatatcac 144
>41986_osa-MIR171f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 98 gattgagccgtgccaatatcac 119
>41539_sly-MIR171b:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 91 attgagccgtgccaatatcacg 112
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 91 attgagccgtgccaatatcacg 112
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 56 gattgagccgtgccaatatcac 77
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>40457_gma-MIR171c:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 73 gattgagccgtgccaatatcac 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tattggtgcggttcaatcaga 52
|||||||||||||||||||||
Sbjct: 15 tattggtgcggttcaatcaga 35
>40454_gma-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 91 attgagccgtgccaatatcacg 112
||||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcacg 91
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatcac 111
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatca 110
|||||||||||||||||||||
Sbjct: 70 gattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatca 110
|||||||||||||||||||||
Sbjct: 69 gattgagccgtgccaatatca 89
>40362_rco-MIR171d:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 85 ccttcgattgagccgtgccaatatc 109
|||| ||||||||||||||||||||
Sbjct: 95 cctttgattgagccgtgccaatatc 119
>42765_zma-MIR171e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatc 109
||||||||||||||||||||
Sbjct: 88 gattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatc 109
||||||||||||||||||||
Sbjct: 83 gattgagccgtgccaatatc 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatc 109
||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatc 109
||||||||||||||||||||
Sbjct: 69 gattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatc 109
||||||||||||||||||||
Sbjct: 115 gattgagccgtgccaatatc 134
>41985_osa-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatc 109
||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatc 109
||||||||||||||||||||
Sbjct: 106 gattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 gattgagccgtgccaatatc 109
||||||||||||||||||||
Sbjct: 113 gattgagccgtgccaatatc 132
