miRNEST 2.0, an integrative microRNA resource :: BLAST
>41770_bdi-MIR319:mirbase
Length = 280
Score = 186 bits (94), Expect = 5e-48
Identities = 192/225 (85%), Gaps = 16/225 (7%)
Strand = Plus / Plus
Query: 3 tttgagggagctcacttcagtccactcatgggaggtagcggggattgaacgagctgccga 62
|||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 29 tttgagggagctttcttctgtccacccatgggaggtagcggggattgaacgagctgccga 88
Query: 63 ctcattcactcgagcacacagtagata--------tg-agactagtccagggcata---- 109
||||||||||||| |||||||| |||| || |||||| |||| ||||||
Sbjct: 89 ctcattcactcgaacacacagtggataactggatatgcagactaatccaaggcataatat 148
Query: 110 ---ccagtatgttacaatatgtactgtgcgaatgagcgaatgcagcgggagattgttctc 166
| ||| || | ||||| ||||||| ||||||||||||| |||||||||||||||||
Sbjct: 149 ctactagtgtggaataatatctactgtgtgaatgagcgaatgaagcgggagattgttctc 208
Query: 167 tctttcctcctccatgcttggactgaagggagctccctcatctct 211
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 209 tctttcctcctccatgcttggactgaagggagctccctcacctct 253
>40070_ath-MIR319b:mirbase
Length = 172
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 180 atgcttggactgaagggagctccct 204
|||||||||||||||||||||||||
Sbjct: 148 atgcttggactgaagggagctccct 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 180 atgcttggactgaagggagctccct 204
|||||||||||||||||||||||||
Sbjct: 187 atgcttggactgaagggagctccct 211
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccct 204
||||||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctccct 182
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccct 204
||||||||||||||||||||||||
Sbjct: 148 tgcttggactgaagggagctccct 171
Score = 44.1 bits (22), Expect = 4e-05
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 17 cttcagtccactcatgggaggtagcggggattgaacgagctgccgactcattca 70
|||||||||||||||||| || || || |||||| |||||||||||||||||
Sbjct: 20 cttcagtccactcatgggtggcagtagg-attgaattagctgccgactcattca 72
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccct 204
||||||||||||||||||||||||
Sbjct: 162 tgcttggactgaagggagctccct 185
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccct 204
||||||||||||||||||||||||
Sbjct: 165 tgcttggactgaagggagctccct 188
>40703_mtr-MIR319:mirbase
Length = 207
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccct 204
||||||||||||||||||||||||
Sbjct: 166 tgcttggactgaagggagctccct 189
>40369_rco-MIR319c:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccct 204
||||||||||||||||||||||||
Sbjct: 160 tgcttggactgaagggagctccct 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 gagctcacttcagtccactcatggg 34
|||||| ||||||||||||||||||
Sbjct: 7 gagctctcttcagtccactcatggg 31
>41282_ctr-MIR319:mirbase
Length = 186
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccc 203
|||||||||||||||||||||||
Sbjct: 154 tgcttggactgaagggagctccc 176
>40368_rco-MIR319b:mirbase
Length = 179
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccctc 205
|||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccctc 175
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccct 204
||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccct 183
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctcc 202
||||||||||||||||||||||
Sbjct: 173 tgcttggactgaagggagctcc 194
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 47 ttgaacgagctgccgactcattcactcgagcac 79
|||||| ||||||||||||||||| || |||||
Sbjct: 52 ttgaactagctgccgactcattcattcaagcac 84
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctcc 202
||||||||||||||||||||||
Sbjct: 171 tgcttggactgaagggagctcc 192
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 17 cttcagtccactcatgggaggtagcggggattgaacgagctgccgactcattca 70
|||||||||||||||||| ||||| ||||| || |||||||||||||||||
Sbjct: 20 cttcagtccactcatgggtggtag-taggatttaattagctgccgactcattca 72
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccct 204
||||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctccct 180
>41185_aqc-MIR319:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccct 204
||||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccct 175
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccct 204
||||||||||||||||||||||
Sbjct: 155 cttggactgaagggagctccct 176
>40465_gma-MIR319b:mirbase
Length = 208
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccct 204
||||||||||||||||||||||
Sbjct: 169 cttggactgaagggagctccct 190
>40464_gma-MIR319a:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccct 204
||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccct 189
>40367_rco-MIR319a:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccct 204
||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccct 206
>40069_ath-MIR319a:mirbase
Length = 176
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 184 ttggactgaagggagctccctc 205
||||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccctc 175
>39858_aly-MIR319a:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 184 ttggactgaagggagctccctc 205
||||||||||||||||||||||
Sbjct: 177 ttggactgaagggagctccctc 198
>39740_smo-MIR319:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccct 204
||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccct 206
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccctc 205
|||||||||||||||| ||||||||
Sbjct: 171 tgcttggactgaagggtgctccctc 195
>42781_zma-MIR319b:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccctc 205
|||||||||||||||| ||||||||
Sbjct: 172 tgcttggactgaagggtgctccctc 196
>42563_sbi-MIR319:mirbase
Length = 249
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccctc 205
|||||||||||||||| ||||||||
Sbjct: 188 tgcttggactgaagggtgctccctc 212
>41995_osa-MIR319b:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 181 tgcttggactgaagggagctccctc 205
|||||||||||||||| ||||||||
Sbjct: 165 tgcttggactgaagggtgctccctc 189
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 184 ttggactgaagggagctccct 204
|||||||||||||||||||||
Sbjct: 157 ttggactgaagggagctccct 177
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 182 gcttggactgaagggagctcc 202
|||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcc 428
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccc 203
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccc 203
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctccc 203
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 ttggactgaagggagctccc 203
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctcc 202
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctcc 202
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 cttggactgaagggagctcc 202
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
