miRNEST 2.0, an integrative microRNA resource :: BLAST
>42649_tae-MIR444b:mirbase
Length = 162
Score = 218 bits (110), Expect = 3e-57
Identities = 152/170 (89%), Gaps = 17/170 (10%)
Strand = Plus / Plus
Query: 8 gatatgcatgtggcggcaccgagcatgaggcaacaactgcattacttgcggggaaggcgc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatatgcatgtggcggcaccgagcatgaggcaacaactgcattacttgcggggaaggcgc 60
Query: 68 aagtaggacacctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatact 127
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 aagtaggacacctgcattacttgcaaacaaggcg-----------------caccatact 103
Query: 128 tgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 177
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 104 tgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 163 bits (82), Expect = 1e-40
Identities = 106/114 (92%)
Strand = Plus / Plus
Query: 62 aggcgcaagtaggacacctgcattacttgcaaacaaggcgcaaaattaatagaagatcac 121
|||| ||||||||||||| |||||| ||||| |||| |||||||||||||||| |||||
Sbjct: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
Query: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcct 175
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
>42089_osa-MIR444d:mirbase
Length = 143
Score = 105 bits (53), Expect = 3e-23
Identities = 95/109 (87%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 39 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 93
Query: 139 tgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaaa 187
||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 94 tgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgccaaa 142
Score = 61.9 bits (31), Expect = 4e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
|||||| ||||||||||||||||||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgc 51
Score = 56.0 bits (28), Expect = 2e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
||||| ||||||||||||| ||||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42088_osa-MIR444d:mirbase
Length = 143
Score = 105 bits (53), Expect = 3e-23
Identities = 95/109 (87%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 39 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 93
Query: 139 tgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaaa 187
||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 94 tgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgccaaa 142
Score = 61.9 bits (31), Expect = 4e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
|||||| ||||||||||||||||||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgc 51
Score = 56.0 bits (28), Expect = 2e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
||||| ||||||||||||| ||||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42087_osa-MIR444d:mirbase
Length = 143
Score = 105 bits (53), Expect = 3e-23
Identities = 95/109 (87%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 39 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 93
Query: 139 tgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaaa 187
||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 94 tgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgccaaa 142
Score = 61.9 bits (31), Expect = 4e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
|||||| ||||||||||||||||||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgc 51
Score = 56.0 bits (28), Expect = 2e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
||||| ||||||||||||| ||||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42082_osa-MIR444a:mirbase
Length = 131
Score = 77.8 bits (39), Expect = 6e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 135 ttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 177
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 42.1 bits (21), Expect = 4e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
|||||||||| | |||||||||| |||| |||||||||||
Sbjct: 52 tttcttgcaaattatgcagttgccacctctagcttgctgcc 12
>42081_osa-MIR444a:mirbase
Length = 131
Score = 77.8 bits (39), Expect = 6e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 135 ttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 177
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 42.1 bits (21), Expect = 4e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
|||||||||| | |||||||||| |||| |||||||||||
Sbjct: 52 tttcttgcaaattatgcagttgccacctctagcttgctgcc 12
>42084_osa-MIR444b:mirbase
Length = 138
Score = 73.8 bits (37), Expect = 1e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaa 186
|||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgccaa 138
>42083_osa-MIR444b:mirbase
Length = 138
Score = 73.8 bits (37), Expect = 1e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaa 186
|||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgccaa 138
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 71.9 bits (36), Expect = 4e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttg 169
|||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 59 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106
Score = 54.0 bits (27), Expect = 9e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||| ||||||||||||| |||||||| |||||||| |||||
Sbjct: 43 ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1
>42091_osa-MIR444f:mirbase
Length = 154
Score = 65.9 bits (33), Expect = 2e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 133 ctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 177
||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
|||||| ||||||||| |||||||||||||||||
Sbjct: 6 ggcaccaagcatgaggttacaactgcattacttgc 40
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 63.9 bits (32), Expect = 1e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||||||||| |||||||||||| |||||||| |||||||||||||
Sbjct: 58 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
Score = 54.0 bits (27), Expect = 9e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||| ||||||||||||| |||||||| |||||||| |||||
Sbjct: 43 ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1
>42086_osa-MIR444c:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 1e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgcca 185
||||||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
Score = 48.1 bits (24), Expect = 6e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 177
||||||||||| |||||||||||| ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42085_osa-MIR444c:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 1e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgcca 185
||||||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
Score = 48.1 bits (24), Expect = 6e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 177
||||||||||| |||||||||||| ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 58.0 bits (29), Expect = 6e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 22 ggcaccgagcatgaggcaacaactgcattactt 54
|||||| ||||||||||||||||||||||||||
Sbjct: 4 ggcaccaagcatgaggcaacaactgcattactt 36
Score = 58.0 bits (29), Expect = 6e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 133 ctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 177
||||||||||||| ||||||||||| ||||||||||||| ||||
Sbjct: 77 ctttcttgcaagttgtgcagttgctgtctcaagcttgctgactcc 121
>42090_osa-MIR444e:mirbase
Length = 140
Score = 56.0 bits (28), Expect = 2e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 140 gcaagtcatgcagttgctgcctcaagcttgctgcct 175
|||||| |||||||||||||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>41805_bdi-MIR444:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 2e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 142 aagtcatgcagttgctgcctcaagcttgctgc 173
|||| |||||||||||||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 50.1 bits (25), Expect = 1e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
|||||||||||| |||||||| || |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 48.1 bits (24), Expect = 6e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||||||||| |||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
