miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42592_sbi-MIR399d:mirbase
          Length = 205

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 149 cgtcctgccaaaggagagttgccctgc 175
           |||||||||||||||||||||||||||
Sbjct: 161 cgtcctgccaaaggagagttgccctgc 187



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  aggcagctctcctctggcaggc 22
          ||||||||||||||||||||||
Sbjct: 22 aggcagctctcctctggcaggc 43




>42044_osa-MIR399d:mirbase
          Length = 286

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 152 cctgccaaaggagagttgccctgc 175
           ||||||||||||||||||||||||
Sbjct: 254 cctgccaaaggagagttgccctgc 277



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aggcagctctcctctggcagg 21
          |||||||||||||||||||||
Sbjct: 12 aggcagctctcctctggcagg 32




>40093_ath-MIR399b:mirbase
          Length = 135

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 152 cctgccaaaggagagttgccctg 174
           |||||||||||||||||||||||
Sbjct: 103 cctgccaaaggagagttgccctg 125




>39885_aly-MIR399b:mirbase
          Length = 154

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 152 cctgccaaaggagagttgccctg 174
           |||||||||||||||||||||||
Sbjct: 104 cctgccaaaggagagttgccctg 126




>42827_zma-MIR399i:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 154 tgccaaaggagagttgccctgc 175
           ||||||||||||||||||||||
Sbjct: 70  tgccaaaggagagttgccctgc 91




>42823_zma-MIR399e:mirbase
          Length = 124

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 153 ctgccaaaggagagttgccctg 174
           ||||||||||||||||||||||
Sbjct: 84  ctgccaaaggagagttgccctg 105




>42597_sbi-MIR399i:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 153 ctgccaaaggagagttgccctg 174
           ||||||||||||||||||||||
Sbjct: 81  ctgccaaaggagagttgccctg 102




>41670_vvi-MIR399c:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 153 ctgccaaaggagagttgccctg 174
           ||||||||||||||||||||||
Sbjct: 51  ctgccaaaggagagttgccctg 72




>41247_csi-MIR399b:mirbase
          Length = 168

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 152 cctgccaaaggagagttgccct 173
           ||||||||||||||||||||||
Sbjct: 123 cctgccaaaggagagttgccct 144




>42050_osa-MIR399j:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 ctgccaaaggagagttgccct 173
           |||||||||||||||||||||
Sbjct: 75  ctgccaaaggagagttgccct 95




>41669_vvi-MIR399b:mirbase
          Length = 117

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 87  tgccaaaggagagttgccctg 107




>41249_csi-MIR399d:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccctg 120




>41192_aqc-MIR399:mirbase
          Length = 98

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 ctgccaaaggagagttgccct 173
           |||||||||||||||||||||
Sbjct: 71  ctgccaaaggagagttgccct 91




>41154_tcc-MIR399i:mirbase
          Length = 157

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 117 tgccaaaggagagttgccctg 137




>41027_pvu-MIR399a:mirbase
          Length = 223

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 89  tgccaaaggagagttgccctg 109




>40746_mtr-MIR399p:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 54  tgccaaaggagagttgccctg 74




>40742_mtr-MIR399l:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 54  tgccaaaggagagttgccctg 74




>40383_rco-MIR399a:mirbase
          Length = 93

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 68  tgccaaaggagagttgccctg 88




>40094_ath-MIR399c:mirbase
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 84  tgccaaaggagagttgccctg 104




>39886_aly-MIR399c:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tgccaaaggagagttgccctg 174
           |||||||||||||||||||||
Sbjct: 89  tgccaaaggagagttgccctg 109




>42596_sbi-MIR399h:mirbase
          Length = 132

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 152 cctgccaaaggagagttgccctgc 175
           |||||||||||||| |||||||||
Sbjct: 91  cctgccaaaggagaattgccctgc 114




>42590_sbi-MIR399b:mirbase
          Length = 121

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 152 cctgccaaaggagagttgccctgc 175
           ||||||||||||||| ||||||||
Sbjct: 80  cctgccaaaggagagctgccctgc 103




>42049_osa-MIR399i:mirbase
          Length = 116

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 152 cctgccaaaggagagttgccctgc 175
           ||||||||||||||| ||||||||
Sbjct: 84  cctgccaaaggagagctgccctgc 107




>41676_vvi-MIR399i:mirbase
          Length = 122

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 gccaaaggagagttgccctg 174
           ||||||||||||||||||||
Sbjct: 93  gccaaaggagagttgccctg 112




>41548_sly-MIR399:mirbase
          Length = 71

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 tgccaaaggagagttgccct 173
           ||||||||||||||||||||
Sbjct: 51  tgccaaaggagagttgccct 70




>41456_ptc-MIR399i:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 tgccaaaggagagttgccct 173
           ||||||||||||||||||||
Sbjct: 79  tgccaaaggagagttgccct 98




>41146_tcc-MIR399a:mirbase
          Length = 136

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 gccaaaggagagttgccctg 174
           ||||||||||||||||||||
Sbjct: 97  gccaaaggagagttgccctg 116