miRNEST 2.0, an integrative microRNA resource :: BLAST
>42829_zma-MIR408:mirbase
Length = 191
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
|||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gttgttgctccctcccctgcactgcctcttccctggctc 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaaca 40
|||||||| ||| ||||||||||| | |||||||||||||
Sbjct: 21 gacagggatgagacagagcatggg-atggggccatcaaca 59
>42052_osa-MIR408:mirbase
Length = 213
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
|||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gttgttgctccctcccctgcactgcctcttccctggctc 175
Score = 44.1 bits (22), Expect = 3e-05
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaacaga 42
|||||||| ||||||||||||||| | ||||| |||||||||
Sbjct: 29 gacagggatgaggcagagcatggg-atggggctatcaacaga 69
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
||||||||| |||||||||||||||||||||||||||||
Sbjct: 210 gttgttgcttcctcccctgcactgcctcttccctggctc 248
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 55 atttctgtttgctcgctcacaaaatggaggga 86
||||||||||||| |||||||||| |||||||
Sbjct: 80 atttctgtttgcttgctcacaaaacggaggga 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaacagaatt 45
|||||||| ||||||||||||||| | | ||||||||||| ||||
Sbjct: 3 gacagggatgaggcagagcatggg-atgaggccatcaacaaaatt 46
>42464_sof-MIR408c:mirbase
Length = 286
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
||||||||| |||||||||||||||||||||||||||||
Sbjct: 231 gttgttgcttcctcccctgcactgcctcttccctggctc 269
Score = 50.1 bits (25), Expect = 5e-07
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaacagaatt 45
|||||||| ||||||||||||||| | ||||||||||||| ||||
Sbjct: 21 gacagggatgaggcagagcatggg-atggggccatcaacaaaatt 64
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 55 atttctgtttgctcgctcacaaaatggaggga 86
||||||||||||| |||||||||| |||||||
Sbjct: 98 atttctgtttgcttgctcacaaaacggaggga 129
>42463_sof-MIR408b:mirbase
Length = 286
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
||||||||| |||||||||||||||||||||||||||||
Sbjct: 231 gttgttgcttcctcccctgcactgcctcttccctggctc 269
Score = 50.1 bits (25), Expect = 5e-07
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaacagaatt 45
|||||||| ||||||||||||||| | ||||||||||||| ||||
Sbjct: 21 gacagggatgaggcagagcatggg-atggggccatcaacaaaatt 64
>42462_sof-MIR408a:mirbase
Length = 283
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
||||||||| |||||||||||||||||||||||||||||
Sbjct: 228 gttgttgcttcctcccctgcactgcctcttccctggctc 266
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 55 atttctgtttgctcgctcacaaaatggaggga 86
||||||||||||| |||||||||| |||||||
Sbjct: 98 atttctgtttgcttgctcacaaaacggaggga 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaacagaatt 45
|||||||| ||||||||||||||| | | ||||||||||| ||||
Sbjct: 21 gacagggatgaggcagagcatggg-atgaggccatcaacaaaatt 64
>42600_sbi-MIR408:mirbase
Length = 205
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggct 146
||||||||| ||||||||||||||||||||||||||||
Sbjct: 168 gttgttgcttcctcccctgcactgcctcttccctggct 205
Score = 54.0 bits (27), Expect = 3e-08
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 2 acagggacgaggcagagcatgggtagggggccatcaaca 40
||||||||||||||||||||||| | |||||||||||||
Sbjct: 1 acagggacgaggcagagcatggg-atggggccatcaaca 38
>42647_tae-MIR408:mirbase
Length = 187
Score = 61.9 bits (31), Expect = 1e-10
Identities = 38/39 (97%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 gttgttgctccctccc-tgcactgcctcttccctggctc 158
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
||||||||| || ||||||||||||||||||||||||||
Sbjct: 142 gttgttgcttccacccctgcactgcctcttccctggctc 180
Score = 58.0 bits (29), Expect = 2e-09
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaacagaatt 45
|||||||||||||||||||||||| | ||||||||||||| ||||
Sbjct: 3 gacagggacgaggcagagcatggg-atggggccatcaacaaaatt 46
>42465_sof-MIR408d:mirbase
Length = 215
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
||||||||| || ||||||||||||||||||||||||||
Sbjct: 160 gttgttgcttccacccctgcactgcctcttccctggctc 198
Score = 58.0 bits (29), Expect = 2e-09
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaacagaatt 45
|||||||||||||||||||||||| | ||||||||||||| ||||
Sbjct: 21 gacagggacgaggcagagcatggg-atggggccatcaacaaaatt 64
>41252_csi-MIR408:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 119 cctcccctgcactgcctcttccctggctc 147
|||||| ||||||||||||||||||||||
Sbjct: 114 cctcccatgcactgcctcttccctggctc 142
>40391_rco-MIR408:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 122 cccctgcactgcctcttccctggct 146
|||||||||||||||||||||||||
Sbjct: 64 cccctgcactgcctcttccctggct 88
>42466_sof-MIR408e:mirbase
Length = 283
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
||||||||| || |||||||||| ||||||||||||||
Sbjct: 228 gttgttgcttacttccctgcactgactcttccctggctc 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 gacagggacgaggcagagcatgggtagggggccatcaacagaatt 45
|||||||| ||||||||||||||| | | ||||||||||| ||||
Sbjct: 21 gacagggatgaggcagagcatggg-atgaggccatcaacaaaatt 64
>41683_vvi-MIR408:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggctc 147
||||||||||||||||||||||
Sbjct: 78 tgcactgcctcttccctggctc 99
>40405_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggctc 147
||||||||||||||||||||||
Sbjct: 82 tgcactgcctcttccctggctc 103
>40404_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggctc 147
||||||||||||||||||||||
Sbjct: 82 tgcactgcctcttccctggctc 103
>40108_ath-MIR408:mirbase
Length = 218
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggctc 147
||||||||||||||||||||||
Sbjct: 121 tgcactgcctcttccctggctc 142
>39897_aly-MIR408:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggctc 147
||||||||||||||||||||||
Sbjct: 118 tgcactgcctcttccctggctc 139
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggctc 147
||||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggctc 86
>41463_ptc-MIR408:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggct 146
|||||||||||||||||||||
Sbjct: 77 tgcactgcctcttccctggct 97
>41193_aqc-MIR408:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 126 tgcactgcctcttccctggct 146
|||||||||||||||||||||
Sbjct: 21 tgcactgcctcttccctggct 1
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggct 146
|||||||||||||||||||||
Sbjct: 77 tgcactgcctcttccctggct 97
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 tgcactgcctcttccctggct 146
|||||||||||||||||||||
Sbjct: 94 tgcactgcctcttccctggct 114
