miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42623_sbi-MIR528:mirbase
          Length = 84

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 2  tggaaggggcatgcagaggagcacga 27
          ||||||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagcacga 26



 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 53 gctctcctgtgcctgcctcttccatt 78
          ||||||||||||||||||||||||||
Sbjct: 59 gctctcctgtgcctgcctcttccatt 84




>42481_ssp-MIR528:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 2  tggaaggggcatgcagaggagcacga 27
          ||||||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagcacga 26



 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 43 cccctcgttagctctcctgtgcctgcctcttcca 76
          ||||||| | ||||||||||||||||||||||||
Sbjct: 59 cccctcgctggctctcctgtgcctgcctcttcca 92




>42832_zma-MIR528a:mirbase
          Length = 123

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 54  ctctcctgtgcctgcctcttccatt 78
           |||||||||||||||||||||||||
Sbjct: 99  ctctcctgtgcctgcctcttccatt 123



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 37/41 (90%), Gaps = 3/41 (7%)
 Strand = Plus / Plus

                                                   
Query: 1  gtggaaggggcatgca---gaggagcacgaacgaggtgtgg 38
          ||||||||||||||||   ||||||||||| ||||||||||
Sbjct: 1  gtggaaggggcatgcagaggaggagcacgagcgaggtgtgg 41




>42102_osa-MIR528:mirbase
          Length = 88

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  gtggaaggggcatgcagaggagca 24
          ||||||||||||||||||||||||
Sbjct: 2  gtggaaggggcatgcagaggagca 25



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 54 ctctcctgtgcctgcctcttccatt 78
          ||||||||||| |||||||||||||
Sbjct: 64 ctctcctgtgcttgcctcttccatt 88




>41806_bdi-MIR528:mirbase
          Length = 160

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  gtggaaggggcatgcagaggagca 24
          ||||||||||||||||||||||||
Sbjct: 35 gtggaaggggcatgcagaggagca 58



 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 55  tctcctgtgcctgcctcttccatt 78
           ||||||||||||||||||||||||
Sbjct: 99  tctcctgtgcctgcctcttccatt 122