miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41243_csi-MIR396c:mirbase
          Length = 178

 Score =  157 bits (79), Expect = 4e-39
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                       
Query: 109 ctctaataataggctacgatttgatgtggctagctgcagctattagaagttcaagaaatc 168
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ctctaataataggctacgatttgatgtggctagctgcagctattagaagttcaagaaatc 159

                              
Query: 169 tgtgggaagaaatggcaaa 187
           |||||||||||||||||||
Sbjct: 160 tgtgggaagaaatggcaaa 178



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 10 cctgtcatgtttttccacag 29
          ||||||||||||||||||||
Sbjct: 1  cctgtcatgtttttccacag 20




>42028_osa-MIR396c:mirbase
          Length = 141

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 159 tcaagaaatctgtgggaagaaatggca 185
           |||||||| ||||||||||||||||||
Sbjct: 115 tcaagaaagctgtgggaagaaatggca 141




>41795_bdi-MIR396e:mirbase
          Length = 201

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 159 tcaagaaatctgtgggaagaaatggca 185
           |||||||| ||||||||||||||||||
Sbjct: 145 tcaagaaagctgtgggaagaaatggca 171



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 154 gaagttcaagaaatctgtgggaagaaatggca 185
           ||||||||||||| |||||| ||| |||||||
Sbjct: 53  gaagttcaagaaagctgtggaaaggaatggca 22




>42584_sbi-MIR396c:mirbase
          Length = 162

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 153 agaagttcaagaaatctgtgggaagaaatg 182
           ||||| |||||||| |||||||||||||||
Sbjct: 121 agaaggtcaagaaagctgtgggaagaaatg 150