miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42370_osa-MIR2124a:mirbase
          Length = 249

 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 14  aaactaattgcacaatttgtatgtaaatggcgagacgaatcttttgagcctaattagtcc 73
           |||| |||||||||  ||| |||||||| |||||||||||||||||||||||||||  ||
Sbjct: 41  aaaccaattgcacagattgcatgtaaatcgcgagacgaatcttttgagcctaattatacc 100

                 
Query: 74  atgatt 79
           ||||||
Sbjct: 101 atgatt 106




>42374_osa-MIR2124e:mirbase
          Length = 247

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 12  aaaaactaattgcacaatttgtatgtaaatggcgagacgaatcttttgagcctaattagt 71
           |||||| |||| ||||| |||  ||||||| |||||||||||||||| |||||||||  |
Sbjct: 37  aaaaaccaattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgct 96

                   
Query: 72  ccatgatt 79
           ||||||||
Sbjct: 97  ccatgatt 104




>42079_osa-MIR442:mirbase
          Length = 233

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 35  tgtaaatggcgagacgaatcttttgagcctaattagtccatgat 78
           ||||||| |||||||||||||||| |||||||||  ||||||||
Sbjct: 57  tgtaaattgcgagacgaatcttttaagcctaattgctccatgat 100




>42099_osa-MIR445h:mirbase
          Length = 277

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 43  gcgagacgaatcttttgagcctaattagtccatgattag 81
           ||||||||||||||||||| |||||||  ||||||||||
Sbjct: 182 gcgagacgaatcttttgagtctaattacaccatgattag 144



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 43  gcgagacgaatcttttgagcctaattagtccatgatta 80
           ||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 95  gcgagacgaattttttaagcctaattaatccataatta 132




>42097_osa-MIR445f:mirbase
          Length = 305

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 43  gcgagacgaatcttttgagcctaattagtccatgattag 81
           ||||||||||||||||||| |||||||  ||||||||||
Sbjct: 197 gcgagacgaatcttttgagtctaattacaccatgattag 159




>42096_osa-MIR445e:mirbase
          Length = 265

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 43  gcgagacgaatcttttgagcctaattagtccatgattag 81
           ||||||||||||||||||| |||||||  ||||||||||
Sbjct: 176 gcgagacgaatcttttgagtctaattacaccatgattag 138



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 43  gcgagacgaatcttttgagcctaattagtccatgatta 80
           ||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 89  gcgagacgaattttttaagcctaattaatccataatta 126




>42093_osa-MIR445b:mirbase
          Length = 264

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 43  gcgagacgaatcttttgagcctaattagtccatgattag 81
           ||||||||||||||||||| |||||||  ||||||||||
Sbjct: 175 gcgagacgaatcttttgagtctaattacaccatgattag 137



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 121 ttaattaggctcaaaaagttcgtctcg 147
           ||||||||||| |||||||||||||||
Sbjct: 115 ttaattaggcttaaaaagttcgtctcg 89




>42094_osa-MIR445c:mirbase
          Length = 260

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 44  cgagacgaatcttttgagcctaattagtccatgattag 81
           ||||||||||||||| ||||||||||  ||||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgattag 136



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 43  gcgagacgaatcttttgagcctaattagtccatgatta 80
           ||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 87  gcgagacgaattttttaagcctaattaatccataatta 124




>42372_osa-MIR2124c:mirbase
          Length = 248

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 108 tgctaatggcagtttaattaggctcaaaaagttcgtctcgtagttttcaggcg 160
           ||||||||  || ||||||||||| || || ||||||||||||||||| ||||
Sbjct: 133 tgctaatgatagattaattaggcttaataaattcgtctcgtagttttctggcg 185




>42092_osa-MIR445a:mirbase
          Length = 268

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 43  gcgagacgaatcttttgagcctaattagtccatgatt 79
           ||||||||||||||||||| |||||||  ||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatt 150



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 43  gcgagacgaatcttttgagcctaattagtccatgatta 80
           ||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 82  gcgagacgaattttttaagcctaattaatccataatta 119




>42098_osa-MIR445g:mirbase
          Length = 275

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 43  gcgagacgaatcttttgagcctaattagtccatgatta 80
           ||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 94  gcgagacgaattttttaagcctaattaatccataatta 131



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 46  agacgaatcttttgagcctaattagtccatgattag 81
           ||||||||||||||||  ||||||  ||||||||||
Sbjct: 178 agacgaatcttttgagtttaattacaccatgattag 143




>42378_osa-MIR2124i:mirbase
          Length = 250

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 35  tgtaaatggcgagacgaatcttttgagcctaattagtccatgat 78
           ||||||| | || ||||||||||| |||||||||  ||||||||
Sbjct: 63  tgtaaattgtgaaacgaatcttttaagcctaattgctccatgat 106




>42376_osa-MIR2124g:mirbase
          Length = 251

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 35  tgtaaatggcgagacgaatcttttgagcctaattagtccatgat 78
           ||||||| |||| ||||||||||| ||| |||||  ||||||||
Sbjct: 64  tgtaaattgcgacacgaatcttttaagcataattgctccatgat 107