miRNEST 2.0, an integrative microRNA resource :: BLAST
>41220_csi-MIR162:mirbase
Length = 201
Score = 283 bits (143), Expect = 2e-77
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 1 atttaacagaaaatagagagagtgaagtcactggaggcagcggttcatcgatcactttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atttaacagaaaatagagagagtgaagtcactggaggcagcggttcatcgatcactttgt 118
Query: 61 gcaaattttgttgtgaaaaataacacaaaatacatgaatcgatcgataaacctctgcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gcaaattttgttgtgaaaaataacacaaaatacatgaatcgatcgataaacctctgcatc 178
Query: 121 cagcgctcactccaactctattc 143
|||||||||||||||||||||||
Sbjct: 179 cagcgctcactccaactctattc 201
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 115 bits (58), Expect = 1e-26
Identities = 90/98 (91%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 29 cactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaa 88
||||||||||||||||||||||||| ||| || ||||||||||||| || ||||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaa 80
Query: 89 aatacatgaatcgatcgataaacctctgcatccagcgc 126
| ||||||||||||||||||||||||||||||||||||
Sbjct: 81 a-tacatgaatcgatcgataaacctctgcatccagcgc 117
>41090_tcc-MIR162:mirbase
Length = 131
Score = 101 bits (51), Expect = 1e-22
Identities = 86/95 (90%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 29 cactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaa 88
||||||||||||||||||||||||| ||| || ||||||||||||| || ||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaa-taacacaa 77
Query: 89 aatacatgaatcgatcgataaacctctgcatccag 123
| ||||||| |||||||||||||||||||||||||
Sbjct: 78 a-tacatgattcgatcgataaacctctgcatccag 111
>40342_rco-MIR162:mirbase
Length = 101
Score = 97.6 bits (49), Expect = 2e-21
Identities = 90/101 (89%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 28 tcactggaggcagcggttcatcgatcactttgtgcaa-attttgttgtgaaaaataacac 86
|||||||||||||||||||||||||| ||| || || |||||||||||||| | || |
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaa-at 59
Query: 87 aaaatacatgaatcgatcgataaacctctgcatccagcgct 127
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 60 aaaacgcatgaatcgatcgataaacctctgcatccagcgct 100
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 87.7 bits (44), Expect = 2e-18
Identities = 88/101 (87%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 25 aagtcactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataac 84
||||||||||||||||||||||||||||| ||| || ||||| || ||||||||| ||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttggt-gtgaaaaatcac 65
Query: 85 acaaaatacatgaatcgatcgataaacctctgcatccagcg 125
| || |||||||||||||||||||||||||||||||||
Sbjct: 66 agaa----catgaatcgatcgataaacctctgcatccagcg 102
>40437_gma-MIR162:mirbase
Length = 102
Score = 79.8 bits (40), Expect = 5e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 93 catgaatcgatcgataaacctctgcatccagcgctcactc 132
||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccagcgctcactc 102
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatc 53
|||||||||||||| |||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatc 32
>40663_mtr-MIR162:mirbase
Length = 124
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 92 acatgaatcgatcgataaacctctgcatccagcgctcact 131
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatccagcgctcact 115
>39813_aly-MIR162b:mirbase
Length = 184
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 93 catgaatcgatcgataaacctctgcatccagcgctcactc 132
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccagcgcttactc 142
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 19 agagtgaagtcactggaggcagcggttcatcgatca 54
||||||||||| ||||||||||||||||||||||||
Sbjct: 38 agagtgaagtcgctggaggcagcggttcatcgatca 73
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 92 acatgaatcgatcgataaacctctgcatccagcgct 127
||||||| ||||||||||||||||||||||||||||
Sbjct: 67 acatgaaccgatcgataaacctctgcatccagcgct 102
>40025_ath-MIR162b:mirbase
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccagcgct 127
||||||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 20 gagtgaagtcactggaggcagcggttcatcgatca 54
|||||||||| ||||||||||||||||||||||||
Sbjct: 1 gagtgaagtcgctggaggcagcggttcatcgatca 35
>41578_vvi-MIR162:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccagcgctcactcc 133
|||||| ||||||||||||||||||||||| |||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagcgttcactcc 103
>40024_ath-MIR162a:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 catgaatcgatcgataaacctctgcatccagcg 125
||||||| |||||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatc 47
>39812_aly-MIR162a:mirbase
Length = 228
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 catgaatcgatcgataaacctctgcatccagcg 125
||||||| |||||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccagcg 158
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatc 90
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatcc 121
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatc 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatc 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
