miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41263_csi-MIR530b:mirbase
          Length = 154

 Score =  305 bits (154), Expect = 5e-84
 Identities = 154/154 (100%)
 Strand = Plus / Plus

                                                                       
Query: 2   atcctttatctgcatttgcacctgcatcttgttgcgttatctggttctggttcgtaaaag 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atcctttatctgcatttgcacctgcatcttgttgcgttatctggttctggttcgtaaaag 60

                                                                       
Query: 62  ccaaagcacaagaagagccaatagccgtcggcagatatggtggcagcatggggttatatg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ccaaagcacaagaagagccaatagccgtcggcagatatggtggcagcatggggttatatg 120

                                             
Query: 122 catcaaggtgcagttgcaagtgcagatgaatgcc 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 121 catcaaggtgcagttgcaagtgcagatgaatgcc 154




>41510_ptc-MIR530b:mirbase
          Length = 172

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 4  cctttatctgcatttgcacctgcatctt 31
          ||||||||||||||||||||||||||||
Sbjct: 13 cctttatctgcatttgcacctgcatctt 40



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 127 aggtgcagttgcaagtgcagatgaatgcc 155
           |||||||| ||||||||||| ||||||||
Sbjct: 136 aggtgcaggtgcaagtgcaggtgaatgcc 164




>41509_ptc-MIR530a:mirbase
          Length = 144

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 4  cctttatctgcatttgcacctgca 27
          ||||||||||||||||||||||||
Sbjct: 13 cctttatctgcatttgcacctgca 36




>41158_tcc-MIR530b:mirbase
          Length = 178

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 4  cctttatctgcatttgcacctgca 27
          ||||||||||||||||||||||||
Sbjct: 13 cctttatctgcatttgcacctgca 36




>41157_tcc-MIR530a:mirbase
          Length = 163

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 6  tttatctgcatttgcacctgca 27
          ||||||||||||||||||||||
Sbjct: 15 tttatctgcatttgcacctgca 36




>41205_aqc-MIR530:mirbase
          Length = 142

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tctgcatttgcacctgcatct 30
          |||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30