miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38977_sja-mir-71:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 actagtgctgtgaaagacgatggtagtgagatgccagttgcatctcgcttccccgccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 actagtgctgtgaaagacgatggtagtgagatgccagttgcatctcgcttccccgccttt 65
Query: 61 cccggtaagaatcac 75
|||||||||||||||
Sbjct: 66 cccggtaagaatcac 80
>39033_sma-mir-71:mirbase
Length = 82
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 actagtgctgtgaaagacgatggtagtgagatgccagttgcatctcgcttccccgccttt 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 actagtgctgtgaaagacgatggtagtgagatgccgattgcatctcgcttccccgccttt 66
Query: 61 cccggtaagaatcac 75
|||||||||||||||
Sbjct: 67 cccggtaagaatcac 81
>38940_emu-mir-71:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtgaaagacgatggtagtgagat 32
|||||||||||||||||||||||
Sbjct: 15 gtgaaagacgatggtagtgagat 37
>38917_egr-mir-71:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtgaaagacgatggtagtgagat 32
|||||||||||||||||||||||
Sbjct: 15 gtgaaagacgatggtagtgagat 37
