miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39012_sja-mir-3489:mirbase
          Length = 87

 Score =  172 bits (87), Expect = 3e-44
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  caattgttcctcacctcaattggtgtcgctgactctgcacgagatgaaggtgcggtggcc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  caattgttcctcacctcaattggtgtcgctgactctgcacgagatgaaggtgcggtggcc 60

                                     
Query: 61 acaacagttcgaggacggggacgtcaa 87
          |||||||||||||||||||||||||||
Sbjct: 61 acaacagttcgaggacggggacgtcaa 87




>39010_sja-mir-3487:mirbase
          Length = 83

 Score =  165 bits (83), Expect = 6e-42
 Identities = 83/83 (100%)
 Strand = Plus / Minus

                                                                      
Query: 3  attgttcctcacctcaattggtgtcgctgactctgcacgagatgaaggtgcggtggccac 62
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 attgttcctcacctcaattggtgtcgctgactctgcacgagatgaaggtgcggtggccac 24

                                 
Query: 63 aacagttcgaggacggggacgtc 85
          |||||||||||||||||||||||
Sbjct: 23 aacagttcgaggacggggacgtc 1