miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39001_sja-mir-3482:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 ctagtatggaactcctcggcagtgttcgcaaacctgaagcccgtggggcagaatctagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctagtatggaactcctcggcagtgttcgcaaacctgaagcccgtggggcagaatctagga 60
Query: 61 tgcgcactgccgaggatttccatactagga 90
||||||||||||||||||||||||||||||
Sbjct: 61 tgcgcactgccgaggatttccatactagga 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 65 cactgccgaggatttccatactag 88
|||||||||||| |||||||||||
Sbjct: 24 cactgccgaggagttccatactag 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 ctagtatggaactcctcggcagtg 24
||||||||||| ||||||||||||
Sbjct: 88 ctagtatggaaatcctcggcagtg 65
>39000_sja-mir-3482:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 ctagtatggaactcctcggcagtgttcgcaaacctgaagcccgtggggcagaatctagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctagtatggaactcctcggcagtgttcgcaaacctgaagcccgtggggcagaatctagga 60
Query: 61 tgcgcactgccgaggatttccatactagga 90
||||||||||||||||||||||||||||||
Sbjct: 61 tgcgcactgccgaggatttccatactagga 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 65 cactgccgaggatttccatactag 88
|||||||||||| |||||||||||
Sbjct: 24 cactgccgaggagttccatactag 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 ctagtatggaactcctcggcagtg 24
||||||||||| ||||||||||||
Sbjct: 88 ctagtatggaaatcctcggcagtg 65
