miRNEST 2.0, an integrative microRNA resource :: BLAST
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 89.7 bits (45), Expect = 3e-19
Identities = 74/81 (91%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaa-tatgcatctcactccttt 59
||||||||||||||||||||||||| |||| ||||||| | | |||||| |||||||||
Sbjct: 12 tgacagaagatagagagcacagatg-atgatatgcaatggactctgcatcccactccttt 70
Query: 60 gtgctctctatgcttctgtca 80
|||||||||||||||||||||
Sbjct: 71 gtgctctctatgcttctgtca 91
>40337_rco-MIR156h:mirbase
Length = 97
Score = 85.7 bits (43), Expect = 4e-18
Identities = 75/84 (89%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaatat----gcatctcactcc 56
||||||||||||||||||||||||| |||| |||||||| | | ||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatg-atgatgtgcaatgactttttctgcatctcactcc 65
Query: 57 tttgtgctctctatgcttctgtca 80
||||||||||||||||||||||||
Sbjct: 66 tttgtgctctctatgcttctgtca 89
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 79.8 bits (40), Expect = 3e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttg 60
||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatg-atgaaatgcaaggagccagcatctcactcctttg 70
Query: 61 tgctctctatgcttctgtca 80
|||||||||| |||||||||
Sbjct: 71 tgctctctattcttctgtca 90
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 79.8 bits (40), Expect = 3e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttg 60
||||||||||||||||||||||||| |||| |||| || | |||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatg-atgatgtgcatggagtttgcatctcactcctttg 70
Query: 61 tgctctctatgcttctgtca 80
||||||||| |||||||||
Sbjct: 71 tgctctctagacttctgtca 90
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 73/82 (89%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaa--tatgcatctcactcctt 58
||||||||||||||||||||||||| |||| |||| || | |||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatg-atgatatgcatggagagtctgcatctcactcctt 59
Query: 59 tgtgctctctatgcttctgtca 80
||||||||||||||||||||||
Sbjct: 60 tgtgctctctatgcttctgtca 81
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 75.8 bits (38), Expect = 4e-15
Identities = 70/78 (89%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaat-gaatatgcatctcactccttt 59
||||||||||||||||||||||||| ||| ||||| | || | || |||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatg-atgttttgcagtagactctggatctcactccttt 70
Query: 60 gtgctctctatgcttctg 77
||||||||||||||||||
Sbjct: 71 gtgctctctatgcttctg 88
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 71.9 bits (36), Expect = 6e-14
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttg 60
|||||||||||||||||||||||| || || ||||| || | |||||||| | |||||
Sbjct: 1 tgacagaagatagagagcacagat-gacgaattgcatggagtttgcatctcgatactttg 59
Query: 61 tgctctctatgcttctgtca 80
||||||||||||||||||||
Sbjct: 60 tgctctctatgcttctgtca 79
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 71.9 bits (36), Expect = 6e-14
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttg 60
||||||||||||||||||||||||| |||| |||| || ||||| |||||||||||
Sbjct: 22 tgacagaagatagagagcacagatg-atgagatgcatggagcctgcatttcactcctttg 80
Query: 61 tgctctctatgcttctgtca 80
|||||||||| |||||||||
Sbjct: 81 tgctctctattcttctgtca 100
>41077_gra-MIR157b:mirbase
Length = 91
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 43 atgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| ||||||||||||||||||||||||||||||
Sbjct: 49 atgcatcccactcctttgtgctctctatgcttctgtca 86
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||| |||||||||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctgtca 167
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatg 31
>41076_gra-MIR157a:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 2e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 43 atgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| |||||||||||||||| |||||||||||||
Sbjct: 59 atgcatcccactcctttgtgctctttatgcttctgtca 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcacagatg 30
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
|||||||||||||||||||||||||| |||||||||
Sbjct: 58 tgcatctcactcctttgtgctctctagtcttctgtca 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
|||||||||||||||||||||||||| |||||||||
Sbjct: 58 tgcatctcactcctttgtgctctctagtcttctgtca 94
>40428_gma-MIR156d:mirbase
Length = 151
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| ||||||||||||||||||| |||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtca 131
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcacagatg 46
>40336_rco-MIR156g:mirbase
Length = 97
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
|||||||||||||||||||||||||| |||||||||
Sbjct: 53 tgcatctcactcctttgtgctctctagtcttctgtca 89
>39799_aly-MIR157b:mirbase
Length = 97
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| |||||||||||||||||| ||||||||||
Sbjct: 57 tgcatcttactcctttgtgctctctaagcttctgtca 93
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcacagatg 29
>40429_gma-MIR156e:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 45 gcatctcactcctttgtgctctctatgcttctgtca 80
||||||||||||||||||||||||| |||||||||
Sbjct: 69 gcatctcactcctttgtgctctctagtcttctgtca 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||| ||||
Sbjct: 22 tgacagaagatagagagcactgatg 46
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatg 31
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 45 gcatctcactcctttgtgctctctatgcttctgtca 80
|||||||| ||||||||||||| ||| |||||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctgtca 89
>40011_ath-MIR157b:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 20 tgacagaagatagagagcacagatg 44
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| |||||||||||||||||| |||||||||
Sbjct: 72 tgcatcttactcctttgtgctctctagccttctgtca 108
>40010_ath-MIR157a:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcacagatg 29
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| |||||||||||||||||| |||||||||
Sbjct: 57 tgcatcttactcctttgtgctctctagccttctgtca 93
>39798_aly-MIR157a:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 17 tgacagaagatagagagcacagatg 41
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| |||||||||||||||||| |||||||||
Sbjct: 69 tgcatcttactcctttgtgctctctagccttctgtca 105
>41525_sly-MIR156a:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 tttgtgctctctatgcttctgtca 80
||||||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctgtca 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 tcctttgtgctctctatgcttctgtca 80
|||||||||||||||| ||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtca 112
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcaca 44
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 tcctttgtgctctctatgcttctgtca 80
|||||||||||||||| ||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtca 112
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcaca 44
>40013_ath-MIR157d:mirbase
Length = 221
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 tcctttgtgctctctatgcttctgtca 80
|||| ||||||||||||||||||||||
Sbjct: 167 tcctatgtgctctctatgcttctgtca 193
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>39801_aly-MIR157d:mirbase
Length = 256
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 tcctttgtgctctctatgcttctgtca 80
|||| ||||||||||||||||||||||
Sbjct: 185 tcctatgtgctctctatgcttctgtca 211
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57
>39727_smo-MIR156b:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacaga 23
|||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34
>40431_gma-MIR156g:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacag 22
||||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcacag 46
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 106 tgacagaagatagagagcaca 86
>40012_ath-MIR157c:mirbase
Length = 217
Score = 44.1 bits (22), Expect = 1e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 44 tgcatctc-actcctttgtgctctctatgcttctgtca 80
|||||||| |||| |||||||||||||| |||||||||
Sbjct: 151 tgcatctctactcttttgtgctctctatacttctgtca 188
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcac 44
>39800_aly-MIR157c:mirbase
Length = 293
Score = 44.1 bits (22), Expect = 1e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 44 tgcatctc-actcctttgtgctctctatgcttctgtca 80
|||||||| |||| |||||||||||||| |||||||||
Sbjct: 202 tgcatctctactcttttgtgctctctatacttctgtca 239
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 56 tgacagaagatagagagcac 75
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcaca 42
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 147 tgacagaagatagagagcaca 167
>40335_rco-MIR156f:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40304_bol-MIR157a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 52 actcctttgtgctctctatgcttctgtca 80
|||| |||||||||||||| |||||||||
Sbjct: 73 actcttttgtgctctctatacttctgtca 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>40260_bna-MIR156c:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 52 actcctttgtgctctctatgcttctgtca 80
|||| |||||||||||||| |||||||||
Sbjct: 109 actcttttgtgctctctatacttctgtca 137
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 19 tgacagaagatagagagcac 38
>39416_pta-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>39415_pta-MIR156a:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>41527_sly-MIR156c:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>40310_bra-MIR157a:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 15 tgacagaagatagagagcac 34
>40259_bna-MIR156b:mirbase
Length = 208
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 26 tgacagaagatagagagcac 45
>41867_far-MIR156b:mirbase
Length = 180
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgga 27
|||||||||| ||||||||||| ||||
Sbjct: 54 tgacagaagagagagagcacagctgga 80
>41866_far-MIR156a:mirbase
Length = 180
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgga 27
|||||||||| ||||||||||| ||||
Sbjct: 54 tgacagaagagagagagcacagctgga 80
>41726_bdi-MIR156:mirbase
Length = 147
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgga 27
|||||||||| ||||||||||| ||||
Sbjct: 101 tgacagaagagagagagcacagctgga 127
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 54 tcctttgtgctctctatgcttctgtca 80
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Sbjct: 89 tcctttgtgctctctagacttctgtca 115
