miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39383_pab-MIR482a:mirbase
Length = 118
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 ggagtggaaggatagggtaagactgcggttaagtgagtctgcttcaataattctttgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ggagtggaaggatagggtaagactgcggttaagtgagtctgcttcaataattctttgctc 65
Query: 61 taatctcaccagtcttccctactcctccccttcc 94
||||||||||||||||||||||||||||| ||||
Sbjct: 66 taatctcaccagtcttccctactcctcccattcc 99
>39432_pta-MIR482d:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 gtggaaggatagggtaagactgcggttaag 33
||||||||||||||||||||| |||||||
Sbjct: 6 gtggaaggatagggtaagactaaggttaag 35
>39431_pta-MIR482c:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 61 taatctcaccagtcttccctactcctccccttcc 94
|||||||| |||||||||||| ||||||| ||||
Sbjct: 46 taatctcatcagtcttccctattcctcccattcc 79
>39430_pta-MIR482b:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 gtggaaggatagggtaagactgcggttaag 33
||||||||||||||||||||| |||||||
Sbjct: 6 gtggaaggatagggtaagactagggttaag 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 69 ccagtcttccctactcctccccttcc 94
||||||||||||||||||||| ||||
Sbjct: 65 ccagtcttccctactcctcccattcc 90
>39429_pta-MIR482a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 gtggaaggatagggtaagactgcggttaag 33
||||||||||||||||||||| |||||||
Sbjct: 6 gtggaaggatagggtaagactaaggttaag 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 69 ccagtcttccctactcctccccttcc 94
||||||||||||||||||||| ||||
Sbjct: 65 ccagtcttccctactcctcccattcc 90
