miRNEST 2.0, an integrative microRNA resource :: BLAST
>40397_ahy-MIR159:mirbase
Length = 197
Score = 339 bits (171), Expect = 4e-94
Identities = 174/175 (99%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 61 atcccacagtactacccatatataccccattatgcagtggtagttctgcggattccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atcccacagtactacccatatataccccattatgcagtggtagttctgcggattccatat 122
Query: 121 cctgggagcttcattacctttccacagatccttatttggattgaagggagctcta 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cctgggagcttcattacctttccacagatccttatttggattgaagggagctcta 177
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 101 bits (51), Expect = 2e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacagtactacccat 79
|||||||||| ||||||||
Sbjct: 62 atcccacagttctacccat 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 148 atccttatttggattgaagggagctcta 175
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 101 bits (51), Expect = 2e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacagtactacccat 79
|||||||||| ||||||||
Sbjct: 62 atcccacagttctacccat 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 148 atccttatttggattgaagggagctcta 175
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>40338_rco-MIR159:mirbase
Length = 180
Score = 97.6 bits (49), Expect = 3e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||| ||||| ||||| ||||| |||||||||||| ||||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 61 atcccacag 69
|||||||||
Sbjct: 64 atcccacag 72
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 125 ggagcttcattacctttccacagatccttatttggattgaagggagctcta 175
|||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 125 ggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 175
>40432_gma-MIR159a:mirbase
Length = 214
Score = 93.7 bits (47), Expect = 4e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||| |||| |||| |||||| ||||||||||| ||||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 atcccacagtactacccat 79
|||||||||| ||||||||
Sbjct: 81 atcccacagttctacccat 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 ccttatttggattgaagggagctcta 175
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||| ||||| ||||| ||||| |||| ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcc 64
||||
Sbjct: 71 atcc 74
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 agatccttatttggattgaagggagctcta 175
|||||| | |||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||| ||||| ||||| ||||| |||| ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcc 64
||||
Sbjct: 71 atcc 74
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 agatccttatttggattgaagggagctcta 175
|||||| | |||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctcta 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||| |||||||||| ||||| |||||||||||| | |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 atcccacag 69
|||||||||
Sbjct: 69 atcccacag 77
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 146 agatccttatttggattgaagggagctcta 175
|||||||| |||||||||||||||||||||
Sbjct: 151 agatccttgtttggattgaagggagctcta 180
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 65.9 bits (33), Expect = 9e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgg 60
|||||||||||||||||||| ||| | || || ||||| ||| |||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 atcccacag 69
|||||||||
Sbjct: 71 atcccacag 79
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 agatccttatttggattgaagggagctcta 175
||||| || |||||||||||||||||||||
Sbjct: 149 agatctttttttggattgaagggagctcta 178
>40435_gma-MIR159d:mirbase
Length = 103
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 35 gggtggattgagctgctaagctatggatcccacagtactacccat 79
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
>41218_csi-MIR159:mirbase
Length = 216
Score = 61.9 bits (31), Expect = 1e-10
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacagagggtcttggt-gggtggattgagctgctaagctatg 59
|||||||||||||||||||| ||||| ||| | |||| ||||||||||| |||||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 gatcccacagt 70
|||||||||||
Sbjct: 72 gatcccacagt 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctcta 175
|||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctcta 206
>41528_sly-MIR159:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaca 22
||||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaaca 22
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctcta 175
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 agctgctaagctatggatccca 66
||||||||||||||||||||||
Sbjct: 48 agctgctaagctatggatccca 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctct 174
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 agctgctaagctatggatccca 66
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctcta 175
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 agctgctaagctatggatccca 66
||||||||||||||||||||||
Sbjct: 60 agctgctaagctatggatccca 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctct 174
||||||||||||||||||||
Sbjct: 169 tttggattgaagggagctct 188
>39804_aly-MIR159a:mirbase
Length = 222
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 agctgctaagctatggatccca 66
||||||||||||||||||||||
Sbjct: 66 agctgctaagctatggatccca 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctcta 175
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctcta 175
|||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctcta 172
>40311_bra-MIR159a:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctcta 175
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctcta 175
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
