miRNEST 2.0, an integrative microRNA resource :: BLAST
>40291_bna-MIR171g:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 50 tctcttagatatctgattgagccgcgtcaatatct 84
|||||||| ||||||||||||||||| ||||||||
Sbjct: 45 tctcttagttatctgattgagccgcgccaatatct 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagat 24
||||||||||||||||| ||||||
Sbjct: 1 gatattggcctggttcactcagat 24
>39849_aly-MIR171a:mirbase
Length = 198
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatcttccc 30
||||||||||||||||| ||||||||||||
Sbjct: 57 gatattggcctggttcactcagatcttccc 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatct 84
||||||||||||||||| ||||||||
Sbjct: 126 tatctgattgagccgcgccaatatct 151
>40322_bra-MIR171e:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatcttcc 29
||||||||||||||||| |||||||||||
Sbjct: 18 gatattggcctggttcactcagatcttcc 46
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 50 tctcttagatatctgattgagccgcgtcaatatct 84
||||| || ||||||||||||||||| ||||||||
Sbjct: 71 tctctcagttatctgattgagccgcgccaatatct 105
>40290_bna-MIR171f:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatcttcc 29
||||||||||||||||| |||||||||||
Sbjct: 18 gatattggcctggttcactcagatcttcc 46
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 50 tctcttagatatctgattgagccgcgtcaatatct 84
||||| || ||||||||||||||||| ||||||||
Sbjct: 71 tctctcagttatctgattgagccgcgccaatatct 105
>40060_ath-MIR171a:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatctt 27
||||||||||||||||| |||||||||
Sbjct: 17 gatattggcctggttcactcagatctt 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatct 84
||||||||||||||||| ||||||||
Sbjct: 84 tatctgattgagccgcgccaatatct 109
>42774_zma-MIR171n:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatct 84
||||||||||||||||| ||||||||
Sbjct: 53 tatctgattgagccgcgccaatatct 78
>41981_osa-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatct 84
||||||||||||||||| ||||||||
Sbjct: 63 tatctgattgagccgcgccaatatct 88
>41623_vvi-MIR171b:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 tgattgagccgcgtcaatatct 84
||||||||||||||||||||||
Sbjct: 69 tgattgagccgcgtcaatatct 90
>40696_mtr-MIR171b:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 tgattgagccgcgtcaatatct 84
||||||||||||||||||||||
Sbjct: 69 tgattgagccgcgtcaatatct 90
>42773_zma-MIR171m:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 gattgagccgcgtcaatatct 84
|||||||||||||||||||||
Sbjct: 62 gattgagccgcgtcaatatct 82
>42772_zma-MIR171l:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 gattgagccgcgtcaatatct 84
|||||||||||||||||||||
Sbjct: 58 gattgagccgcgtcaatatct 78
>42553_sbi-MIR171h:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 gattgagccgcgtcaatatct 84
|||||||||||||||||||||
Sbjct: 60 gattgagccgcgtcaatatct 80
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatc 83
||||||||||||||||| |||||||
Sbjct: 53 tatctgattgagccgcgccaatatc 77
>41989_osa-MIR171i:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 gattgagccgcgtcaatatct 84
|||||||||||||||||||||
Sbjct: 89 gattgagccgcgtcaatatct 109
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatc 25
||||||||||||||||| |||||||
Sbjct: 11 gatattggcctggttcactcagatc 35
>40059_ath-MIR170:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 atctgattgagccgcgtcaatatct 84
|||||||||||||| ||||||||||
Sbjct: 56 atctgattgagccgtgtcaatatct 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagat 24
||||||||||||||||| ||||||
Sbjct: 16 gatattggcctggttcactcagat 39
>39848_aly-MIR170:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 atctgattgagccgcgtcaatatct 84
|||||||||||||| ||||||||||
Sbjct: 114 atctgattgagccgtgtcaatatct 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagat 24
||||||||||||||||| ||||||
Sbjct: 75 gatattggcctggttcactcagat 98
>41281_ctr-MIR171:mirbase
Length = 371
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 attgagccgcgtcaatatct 84
||||||||||||||||||||
Sbjct: 103 attgagccgcgtcaatatct 122
>42761_zma-MIR171a:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 61 tctgattgagccgcgtcaatatc 83
||||||||||||||| |||||||
Sbjct: 77 tctgattgagccgcgccaatatc 99
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 61 tctgattgagccgcgtcaatatc 83
||||||||||||||| |||||||
Sbjct: 68 tctgattgagccgcgccaatatc 90
>41538_sly-MIR171a:mirbase
Length = 122
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 16 gatattggcctggttcactcaga 38
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 21 gatattggcctggttcactcaga 43
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 6 gatattggcctggttcactcaga 28
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 6 gatattggcctggttcactcaga 28
>40364_rco-MIR171f:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 4 gatattggcctggttcactcaga 26
