miRNEST 2.0, an integrative microRNA resource :: BLAST
>40043_ath-MIR168a:mirbase
Length = 138
Score = 97.6 bits (49), Expect = 1e-21
Identities = 93/104 (89%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga-ctaattcg-ctgacacagccacgtggctctttttc--tt 56
|||||||||||||||||||| | |||||| ||||||||||| |||| || || | ||
Sbjct: 18 tcgcttggtgcaggtcgggaaccaattcggctgacacagcctcgtgacttttaaaccttt 77
Query: 57 attggtttgtgagcagggattggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 attggtttgtgagcagggattggatcccgccttgcatcaactga 121
>39832_aly-MIR168a:mirbase
Length = 155
Score = 91.7 bits (46), Expect = 9e-20
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 55 ttattggtttgtgagcagggattggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ttattggtttgtgagcagggattggatcccgccttgcatcaactga 127
>40271_bna-MIR168:mirbase
Length = 133
Score = 67.9 bits (34), Expect = 1e-12
Identities = 83/97 (85%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggg-actaattcgctgacacagccacgtggctctttttcttatt 59
||||||||||||||||||| ||| ||| |||||||| ||||||||| |||| | ||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacaccgccacgtgg--ctttccatggtt 75
Query: 60 ggtttgtgagcagggattggatcccgccttgcatcaa 96
|| |||||||||||||| ||||||||||||| |||||
Sbjct: 76 ggcttgtgagcagggatcggatcccgccttgtatcaa 112
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 103 attggatcccgccttgcatcaactga 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcggga 30
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 127 attggatcccgccttgcatcaactga 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcggga 30
>41215_crt-MIR168:mirbase
Length = 201
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 136 attggatcccgccttgcatcaactga 161
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcggga 40
>41210_ccl-MIR168:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 135 attggatcccgccttgcatcaactga 160
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 20 tcgcttggtgcaggtcggga 39
>41101_tcc-MIR168:mirbase
Length = 167
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 120 attggatcccgccttgcatcaactga 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcggga 40
>40448_gma-MIR168:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 81 attggatcccgccttgcatcaactga 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcggga 38
>40355_rco-MIR168:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 99 attggatcccgccttgcatcaactga 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 6 tcgcttggtgcaggtcggga 25
>41596_vvi-MIR168:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 gatcccgccttgcatcaactga 100
||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactga 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcggga 30
>40044_ath-MIR168b:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggg-actaattcgctgacacagccacgtg 44
||||||||||||||||||| ||| ||| |||||||| | ||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactgattggctgacaccgacacgtg 63
>39833_aly-MIR168b:mirbase
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 43 tcgcttggtgcaggtcggga 62
