miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 333 bits (168), Expect = 2e-92
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 cccacagccctataagcagagattataattttggataggcttgtggcttgcatatctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cccacagccctataagcagagattataattttggataggcttgtggcttgcatatctcag 125
Query: 121 gagcttcattaccttgtattagatccttgtttggattgaagggagctc 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gagcttcattaccttgtattagatccttgtttggattgaagggagctc 173
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 119 bits (60), Expect = 7e-28
Identities = 144/169 (85%), Gaps = 6/169 (3%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||| | || || ||||||||| |||||||||||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacagccctataagca-gagattataattttggataggcttgtggcttgcatatctca 119
||||||||||||| | || || | ||||| ||| ||| || |||||||||||||||
Sbjct: 73 cccacagccctatcaccatcag----tcatttt-gatgggcctgcggcttgcatatctca 127
Query: 120 ggagcttcattaccttgtattagatccttgtttggattgaagggagctc 168
||||||| ||||||| | ||||||| || |||||||||||||||||||
Sbjct: 128 ggagctttattacctaatgttagatctttttttggattgaagggagctc 176
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 113 bits (57), Expect = 4e-26
Identities = 143/169 (84%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacagccctataagcagagattataattttggataggcttgtggcttgcatatctcag 120
||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 71 cccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctcag 130
Query: 121 gagcttcatta-ccttgtattagatccttgtttggattgaagggagctc 168
||||| ||||| || || ||||||||||||||||||||||||||||||
Sbjct: 131 gagctgcattatccaagt-ttagatccttgtttggattgaagggagctc 178
>40397_ahy-MIR159:mirbase
Length = 197
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 61 cccacag 67
|||||||
Sbjct: 65 cccacag 71
Score = 50.1 bits (25), Expect = 5e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 120 ggagcttcattaccttgtattagatccttgtttggattgaagggagctc 168
|||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 127 ggagcttcattacctttccacagatccttatttggattgaagggagctc 175
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 91.7 bits (46), Expect = 2e-19
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 91.7 bits (46), Expect = 2e-19
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>40432_gma-MIR159a:mirbase
Length = 214
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacag 67
|||||||
Sbjct: 83 cccacag 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 145 ccttgtttggattgaagggagctc 168
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>41218_csi-MIR159:mirbase
Length = 216
Score = 83.8 bits (42), Expect = 4e-17
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttg-atgggtagattgagctgctgagctatgga 59
|||||||||||||||||| ||||| ||| | | ||||| |||||||||||||||||||||
Sbjct: 14 gagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgga 73
Query: 60 tcccacagccctat 73
|||||||| |||||
Sbjct: 74 tcccacagtcctat 87
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatatctcaggagcttcattacc 133
|||||||||||||||||||||| || ||| ||||||||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacc 164
>40435_gma-MIR159d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 39 attgagctgctgagctatggatcccacag 67
||||||||||| |||||||||||||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
>41528_sly-MIR159:mirbase
Length = 177
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 39 attgagctgctgagctatggatcccacagccctat 73
||||||||||||| |||||||| || |||||||||
Sbjct: 41 attgagctgctgacctatggattcctcagccctat 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 53/63 (84%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 108 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 165
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 172
Query: 166 ctc 168
|||
Sbjct: 173 ctc 175
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 104 tggcttgcatatctcaggagctt 126
|||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagctt 152
>42700_zma-MIR159k:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctc 197
>42699_zma-MIR159j:mirbase
Length = 252
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctc 249
>42691_zma-MIR159b:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctc 200
>42634_tae-MIR159a:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctc 29
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctc 174
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 gtttggattgaagggagctc 168
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>39806_aly-MIR159c:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 gtttggattgaagggagctc 168
||||||||||||||||||||
Sbjct: 196 gtttggattgaagggagctc 215
