miRNEST 2.0, an integrative microRNA resource :: BLAST
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 79.8 bits (40), Expect = 3e-16
Identities = 77/87 (88%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcct--gaatttggctgtggaagaacacaaagcaa 58
||||||||||||||||||||||||||||| |||||||| |||| || | |||| | ||
Sbjct: 14 tggaggcagcggttcatcgatctcttcctgggaatttgg-tgtgaaaaatcacagaacat 72
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatcca 99
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 75.8 bits (38), Expect = 4e-15
Identities = 79/89 (88%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctga--atttggctgtg-gaagaacacaaag-c 56
||||||||||||||||||||||||||||||| |||| | |||| ||| |||||||| |
Sbjct: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 84
Query: 57 aagaatcggtcgataaacctctgcatcca 85
| |||||| ||||||||||||||||||||
Sbjct: 85 atgaatcgatcgataaacctctgcatcca 113
>41578_vvi-MIR162:mirbase
Length = 103
Score = 73.8 bits (37), Expect = 2e-14
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaaagcaaga 60
|||| ||||||||||||||||||||||||||| ||| |||| || || || | |||||
Sbjct: 10 tggatgcagcggttcatcgatctcttcctgaaattgt-tgtgaaaaaag-cagatcaaga 67
Query: 61 atcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||
Sbjct: 68 atcggtcgataaacctctgcatcca 92
>41090_tcc-MIR162:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 1e-12
Identities = 78/89 (87%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg--aatttggctgtg-gaagaacacaaag-c 56
|||||||||||||||||||||||||||||| ||||| | |||| ||| |||||||| |
Sbjct: 22 tggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaatac 81
Query: 57 aagaatcggtcgataaacctctgcatcca 85
| || ||| ||||||||||||||||||||
Sbjct: 82 atgattcgatcgataaacctctgcatcca 110
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatctcttcctg 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>40342_rco-MIR162:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 5 tggaggcagcggttcatcgatctcttcctg 34
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatcca 95
>40025_ath-MIR162b:mirbase
Length = 111
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 52 aaagcaagaatcggtcgataaacctctgcatcca 85
||||||||||||| ||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatcca 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 13 tggaggcagcggttcatcgatc 34
>40024_ath-MIR162a:mirbase
Length = 140
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 26 tggaggcagcggttcatcgatctcttcctg 55
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 52 aaagcaagaatcggtcgataaacctctgcatcca 85
|||||| |||| | ||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatcca 108
>39812_aly-MIR162a:mirbase
Length = 228
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 69 tggaggcagcggttcatcgatctcttcctg 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 52 aaagcaagaatcggtcgataaacctctgcatcca 85
|||||| |||| | ||||||||||||||||||||
Sbjct: 122 aaagcatgaatagatcgataaacctctgcatcca 155
>40437_gma-MIR162:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaat 33
|||| ||||||||||||||||||||||||||||
Sbjct: 11 tggatgcagcggttcatcgatctcttcctgaat 43
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatcca 92
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaa 32
||||||||||||||||||||||| ||||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctgaa 43
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaa 32
||||||||||||||||||||||| ||||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctgaa 43
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>42708_zma-MIR162:mirbase
Length = 130
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatcca 129
>41530_sly-MIR162:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatcca 98
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaattt 35
|||| |||||||||||||||||| |||||||||||
Sbjct: 22 tggatgcagcggttcatcgatctgttcctgaattt 56
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||||
Sbjct: 80 gaatcggtcgataaacctctgcatcca 106
>39813_aly-MIR162b:mirbase
Length = 184
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 52 aaagcaagaatcggtcgataaacctctgcatcca 85
|||||| |||||| ||||||||||||||||||||
Sbjct: 99 aaagcatgaatcgatcgataaacctctgcatcca 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 51 tggaggcagcggttcatcgatc 72
>42502_sbi-MIR162:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatcca 126
>41929_osa-MIR162a:mirbase
Length = 171
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatcca 162
>41220_csi-MIR162:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatcca 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 90 tggaggcagcggttcatcgatc 111
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcc 84
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 50 acaaagcaagaatcggtcgataaacctctgcatcca 85
|||| ||| |||||| ||||||| ||||||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatcca 123
