miRNEST 2.0, an integrative microRNA resource :: BLAST
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 333 bits (168), Expect = 3e-92
Identities = 171/172 (99%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 atcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctc 128
Query: 121 aagagctgcattatccaagtttagatccttgtttggattgaagggagctcta 172
| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aggagctgcattatccaagtttagatccttgtttggattgaagggagctcta 180
>40338_rco-MIR159:mirbase
Length = 180
Score = 113 bits (57), Expect = 4e-26
Identities = 146/173 (84%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
|||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 61 atcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctc 120
||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 64 atcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctc 123
Query: 121 aagagctgcattatccaagt-ttagatccttgtttggattgaagggagctcta 172
| ||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 124 aggagcttcatta-ccttgtattagatccttgtttggattgaagggagctcta 175
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 89.7 bits (45), Expect = 6e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
||||||||||||||||||||| |||| ||||||||||| |||||||||||| | |||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 145 atccttgtttggattgaagggagctcta 172
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 89.7 bits (45), Expect = 6e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
||||||||||||||||||||| |||| ||||||||||| |||||||||||| | |||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 145 atccttgtttggattgaagggagctcta 172
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>40397_ahy-MIR159:mirbase
Length = 197
Score = 89.7 bits (45), Expect = 6e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
|||||||||||||||||||| |||||||||| |||||||||||||||||| | |||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 61 atcccacag 69
|||||||||
Sbjct: 63 atcccacag 71
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 143 agatccttgtttggattgaagggagctcta 172
|||||||| |||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctcta 177
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 87.7 bits (44), Expect = 3e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
|||||||||||||||||||||||| | || | |||||||||| |||||||||| ||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 atcccacagccctatc 76
||||||||||||||||
Sbjct: 71 atcccacagccctatc 86
>40432_gma-MIR159a:mirbase
Length = 214
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
||||||||||||||||||||| |||| ||||||||||| ||||||||||| | |||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 atcccacag 69
|||||||||
Sbjct: 81 atcccacag 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 147 ccttgtttggattgaagggagctcta 172
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 79.8 bits (40), Expect = 6e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
|||||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcc 64
||||
Sbjct: 71 atcc 74
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 79.8 bits (40), Expect = 6e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
|||||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcc 64
||||
Sbjct: 71 atcc 74
>41218_csi-MIR159:mirbase
Length = 216
Score = 63.9 bits (32), Expect = 4e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttact-gggtagattgagctgctgacttatg 59
|||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| ||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 gatcccacagccctat 75
|||||||||| |||||
Sbjct: 72 gatcccacagtcctat 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatat 117
||||||||||||||||||||||
Sbjct: 125 gataggcttgtggcttgcatat 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctcta 206
>41528_sly-MIR159:mirbase
Length = 177
Score = 56.0 bits (28), Expect = 9e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 60
|||||||||||||||||||| | | ||| || || || |||||||||||||| |||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 atcccacagccctatc 76
|| || ||||||||||
Sbjct: 61 attcctcagccctatc 76
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctcta 172
>40311_bra-MIR159a:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
