miRNEST 2.0, an integrative microRNA resource :: BLAST
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 147 bits (74), Expect = 1e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 19 gatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaatacga 78
Query: 61 tctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||
Sbjct: 79 tctcagattgagccgcgccaatatca 104
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 109 bits (55), Expect = 3e-25
Identities = 79/86 (91%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||| || || ||| |||||||||||
Sbjct: 6 gatgttggtgaggttcaatccgaagacggatttac--atgtatagagttgtaaaatacga 63
Query: 61 tctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||
Sbjct: 64 tctcagattgagccgcgccaatatca 89
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 91.7 bits (46), Expect = 8e-20
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 11 gatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacga 70
Query: 61 tctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||
Sbjct: 71 tctcagattgagccgcgccaatatca 96
>40365_rco-MIR171g:mirbase
Length = 89
Score = 89.7 bits (45), Expect = 3e-19
Identities = 76/86 (88%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||| |||| || ||||| ||||
Sbjct: 4 gatgttggtgaggttcaatccgaagacggatttac----acattctgttgtaaaggacga 59
Query: 61 tctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||
Sbjct: 60 tctcagattgagccgcgccaatatca 85
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 85.7 bits (43), Expect = 5e-18
Identities = 75/86 (87%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
|||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 12 gatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacga 65
Query: 61 tctcagattgagccgcgccaatatca 86
|||| |||||||||||||||||||||
Sbjct: 66 tctctgattgagccgcgccaatatca 91
>41541_sly-MIR171d:mirbase
Length = 112
Score = 71.9 bits (36), Expect = 7e-14
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
|||||||||||||||||||||||||||| ||||| | | ||| ||||||| ||||
Sbjct: 12 gatgttggtgaggttcaatccgaagacgaatttatgctt--attt--tcgtaaagaacga 67
Query: 61 tctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||
Sbjct: 68 tctcagattgagccgcgccaatatca 93
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 gtaaaatacgatctcagattgagccgcgccaatatca 86
||||||| |||||||||||||||||||||||||||||
Sbjct: 56 gtaaaatccgatctcagattgagccgcgccaatatca 92
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 59 gatctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatca 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaaga 26
|||||||||||||||||||| |||||
Sbjct: 12 gatgttggtgaggttcaatctgaaga 37
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 ctcagattgagccgcgccaatatca 86
|||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatca 85
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 tcagattgagccgcgccaatatca 86
||||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatca 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaaga 26
|||||||||||||||||||| |||||
Sbjct: 21 gatgttggtgaggttcaatctgaaga 46
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 tcagattgagccgcgccaatatca 86
||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatca 84
>39739_smo-MIR171d:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 tctcagattgagccgcgccaatatca 86
||||| ||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatca 90
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatca 86
|||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatca 104
>41540_sly-MIR171c:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatca 86
|||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatca 99
>41231_csi-MIR171a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatca 86
|||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatca 88
>41211_ccl-MIR171:mirbase
Length = 321
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatca 86
|||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatca 143
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 4 ttggtgaggttcaatccga 22
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 3 ttggtgaggttcaatccga 21
>41981_osa-MIR171a:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 14 ttggtgaggttcaatccga 32
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
