miRNEST 2.0, an integrative microRNA resource :: BLAST
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 tgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttggg 81
Query: 61 agtgtgctctctactcttctgtca 84
||||||||||||||||||||||||
Sbjct: 82 agtgtgctctctactcttctgtca 105
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 tgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttggg 77
Query: 61 agtgtgctctctactcttctgtca 84
||||||||||||||||||||||||
Sbjct: 78 agtgtgctctctactcttctgtca 101
>40430_gma-MIR156f:mirbase
Length = 106
Score = 71.9 bits (36), Expect = 7e-14
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttggg 60
|||||||||||||||||||||||||| | |||||| |||| | ||| |||||||||||
Sbjct: 12 tgacagaagagagagagcacaacccg-ggaatggttaaaggagtctttgcctttgttggg 70
Query: 61 agtgtgctctct 72
||||||||||||
Sbjct: 71 agtgtgctctct 82
>40334_rco-MIR156e:mirbase
Length = 95
Score = 71.9 bits (36), Expect = 7e-14
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttggg 60
|||||||||||||||||||||||||| | || ||||| ||||| |||||||||||
Sbjct: 6 tgacagaagagagagagcacaacccggcattaggctaaagagtctttg-cctttgttggg 64
Query: 61 agtgtgctctctactcttctgtca 84
|||||||||||| |||||||||||
Sbjct: 65 agtgtgctctctcctcttctgtca 88
>40426_gma-MIR156b:mirbase
Length = 120
Score = 56.0 bits (28), Expect = 4e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttggg 60
|||||||||||||||||||||||||| | ||||| |||| | ||| |||||||||||
Sbjct: 21 tgacagaagagagagagcacaacccg-ggaatggctaaaggagtctttgcctttgttggg 79
Query: 61 agtgtgctctct 72
||||||| ||||
Sbjct: 80 agtgtgccctct 91
>41914_osa-MIR156k:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacccg 26
||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacccg 26
||||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaacccg 46
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 52 tttgttgggagtgtgctctctactcttctgtca 84
||||||||||||||||| ||| ||||||||||
Sbjct: 72 tttgttgggagtgtgctttctcttcttctgtca 104
>42687_zma-MIR156j:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaaccc 25
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaaccc 25
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>41204_aqc-MIR529:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaaccc 25
|||||||||||||||||||||||||
Sbjct: 18 tgacagaagagagagagcacaaccc 42
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 52 tttgttgggagtgtgctctctactcttctgtca 84
||||||||||||||||||| | |||||||||||
Sbjct: 69 tttgttgggagtgtgctctttgctcttctgtca 101
>41877_far-MIR529:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 48 tgacagaagagagagagcaca 68
>41867_far-MIR156b:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 54 tgacagaagagagagagcaca 74
>41866_far-MIR156a:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 54 tgacagaagagagagagcaca 74
>41726_bdi-MIR156:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 101 tgacagaagagagagagcaca 121
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaaccc 25
||||||||||||| |||||||||||
Sbjct: 11 tgacagaagagagggagcacaaccc 35
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 ttgggagtgtgctctctactcttctgtca 84
||||||||||||||||| ||||||||||
Sbjct: 64 ttgggagtgtgctctctcttcttctgtca 92
>41298_ptc-MIR156k:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaaccc 25
||||||||||||| |||||||||||
Sbjct: 11 tgacagaagagagggagcacaaccc 35
>40648_mtr-MIR156:mirbase
Length = 460
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>40427_gma-MIR156c:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacc 24
|||||||||| |||||||||||||
Sbjct: 147 tgacagaagatagagagcacaacc 170
>40009_ath-MIR156h:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacc 24
|||||||||| |||||||||||||
Sbjct: 12 tgacagaagaaagagagcacaacc 35
>39797_aly-MIR156h:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacc 24
|||||||||| |||||||||||||
Sbjct: 8 tgacagaagaaagagagcacaacc 31
>39506_ppt-MIR529d:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 cagaagagagagagcacaacccga 27
|||||||||||||||||| |||||
Sbjct: 36 cagaagagagagagcacagcccga 59
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaacc 24
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
>41568_vvi-MIR156h:mirbase
Length = 228
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagca 19
|||||||||||||||||||
Sbjct: 11 tgacagaagagagagagca 29
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 12 tgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 22 tgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 7 tgacagaagatagagagcacaac 29
