miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39424_pta-MIR319:mirbase
          Length = 206

 Score =  387 bits (195), Expect = e-108
 Identities = 195/195 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagctcccttcaatccaagaaatgcgtgtttagtgacagtacatctcctgcgtcatgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   ggagctcccttcaatccaagaaatgcgtgtttagtgacagtacatctcctgcgtcatgca 67

                                                                       
Query: 61  caccactatcctgtcatgcaggtcgattgattgatttgttcaggctgctggagagtcacg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  caccactatcctgtcatgcaggtcgattgattgatttgttcaggctgctggagagtcacg 127

                                                                       
Query: 121 gacagggaagtagaatgcatgaatcagcagctgaaccaccgctgcacaagctttggttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gacagggaagtagaatgcatgaatcagcagctgaaccaccgctgcacaagctttggttgg 187

                          
Query: 181 actgaagggagctcc 195
           |||||||||||||||
Sbjct: 188 actgaagggagctcc 202




>39417_pta-MIR159a:mirbase
          Length = 210

 Score =  387 bits (195), Expect = e-108
 Identities = 195/195 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggagctcccttcaatccaagaaatgcgtgtttagtgacagtacatctcctgcgtcatgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggagctcccttcaatccaagaaatgcgtgtttagtgacagtacatctcctgcgtcatgca 144

                                                                       
Query: 61  caccactatcctgtcatgcaggtcgattgattgatttgttcaggctgctggagagtcacg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 caccactatcctgtcatgcaggtcgattgattgatttgttcaggctgctggagagtcacg 84

                                                                       
Query: 121 gacagggaagtagaatgcatgaatcagcagctgaaccaccgctgcacaagctttggttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  gacagggaagtagaatgcatgaatcagcagctgaaccaccgctgcacaagctttggttgg 24

                          
Query: 181 actgaagggagctcc 195
           |||||||||||||||
Sbjct: 23  actgaagggagctcc 9




>41302_ptc-MIR159d:mirbase
          Length = 194

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 1   ggagctcccttcaatccaagaaa 23
           |||||||||||||||||||||||
Sbjct: 184 ggagctcccttcaatccaagaaa 162




>40703_mtr-MIR319:mirbase
          Length = 207

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 171 ctttggttggactgaagggagctcc 195
           ||||| |||||||||||||||||||
Sbjct: 163 ctttgcttggactgaagggagctcc 187




>40069_ath-MIR319a:mirbase
          Length = 176

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 171 ctttggttggactgaagggagctcc 195
           ||||| |||||||||||||||||||
Sbjct: 148 ctttgattggactgaagggagctcc 172




>39858_aly-MIR319a:mirbase
          Length = 221

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 171 ctttggttggactgaagggagctcc 195
           ||||| |||||||||||||||||||
Sbjct: 171 ctttgattggactgaagggagctcc 195




>42693_zma-MIR159d:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ggagctcccttcaatccaag 20
           ||||||||||||||||||||
Sbjct: 197 ggagctcccttcaatccaag 178




>42692_zma-MIR159c:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ggagctcccttcaatccaag 20
           ||||||||||||||||||||
Sbjct: 197 ggagctcccttcaatccaag 178




>42495_sbi-MIR159b:mirbase
          Length = 253

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ggagctcccttcaatccaag 20
           ||||||||||||||||||||
Sbjct: 233 ggagctcccttcaatccaag 214




>42454_sof-MIR159c:mirbase
          Length = 238

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ggagctcccttcaatccaag 20
           ||||||||||||||||||||
Sbjct: 218 ggagctcccttcaatccaag 199




>41528_sly-MIR159:mirbase
          Length = 177

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 2   gagctcccttcaatccaagaaatg 25
           |||||||||||||||||| |||||
Sbjct: 175 gagctcccttcaatccaaaaaatg 152




>39730_smo-MIR159:mirbase
          Length = 279

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ggagctcccttcaatccaag 20
           ||||||||||||||||||||
Sbjct: 268 ggagctcccttcaatccaag 249




>39419_pta-MIR159c:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  ggagctcccttcaatccaag 20
          ||||||||||||||||||||
Sbjct: 68 ggagctcccttcaatccaag 49