miRNEST 2.0, an integrative microRNA resource :: BLAST
>41578_vvi-MIR162:mirbase
Length = 103
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctgaaattgttgtgaaaaaagcagatcaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ctggatgcagcggttcatcgatctcttcctgaaattgttgtgaaaaaagcagatcaagaa 68
Query: 61 tcggtcgataaacctctgcatccag 85
|||||||||||||||||||||||||
Sbjct: 69 tcggtcgataaacctctgcatccag 93
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 73.8 bits (37), Expect = 2e-14
Identities = 77/88 (87%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcct--gaaattgttgtgaaaaa-agcagatcaa 57
||||| |||||||||||||||||||||||| ||| ||| ||||||||| |||| ||
Sbjct: 13 ctggaggcagcggttcatcgatctcttcctgggaatttggtgtgaaaaatcacagaacat 72
Query: 58 gaatcggtcgataaacctctgcatccag 85
|||||| |||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatccag 100
>40437_gma-MIR162:mirbase
Length = 102
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctgaa 33
|||||||||||||||||||||||||||||||||
Sbjct: 10 ctggatgcagcggttcatcgatctcttcctgaa 42
>40663_mtr-MIR162:mirbase
Length = 124
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctgaa 33
|||||||||||||||||||||||| ||||||||
Sbjct: 21 ctggatgcagcggttcatcgatctgttcctgaa 53
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
||||||||||||||||||||||||||||
Sbjct: 80 gaatcggtcgataaacctctgcatccag 107
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctga 32
||||| ||||||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctga 55
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctg 41
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tcgataaacctctgcatccag 85
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41090_tcc-MIR162:mirbase
Length = 131
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctg 51
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tcgataaacctctgcatccag 85
|||||||||||||||||||||
Sbjct: 91 tcgataaacctctgcatccag 111
>40342_rco-MIR162:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctg 34
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
|||||| |||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatccag 96
>40025_ath-MIR162b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 55 caagaatcggtcgataaacctctgcatccag 85
||||||||| |||||||||||||||||||||
Sbjct: 69 caagaatcgatcgataaacctctgcatccag 99
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatc 23
||||| |||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34
>40024_ath-MIR162a:mirbase
Length = 140
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tcgataaacctctgcatccag 85
|||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatccag 109
>39812_aly-MIR162a:mirbase
Length = 228
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctg 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tcgataaacctctgcatccag 85
|||||||||||||||||||||
Sbjct: 136 tcgataaacctctgcatccag 156
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctgaa 33
||||| |||||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tcgataaacctctgcatccag 85
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatctcttcctgaa 33
||||| |||||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tcgataaacctctgcatccag 85
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
|||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41220_csi-MIR162:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
|||||| |||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccag 181
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatc 23
||||| |||||||||||||||||
Sbjct: 89 ctggaggcagcggttcatcgatc 111
>39813_aly-MIR162b:mirbase
Length = 184
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
|||||| |||||||||||||||||||||
Sbjct: 106 gaatcgatcgataaacctctgcatccag 133
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ctggatgcagcggttcatcgatc 23
||||| |||||||||||||||||
Sbjct: 50 ctggaggcagcggttcatcgatc 72
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatcc 83
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 58 gaatcggtcgataaacctctgcatccag 85
|||||| ||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
