miRNEST 2.0, an integrative microRNA resource :: BLAST
>40464_gma-MIR319a:mirbase
Length = 207
Score = 202 bits (102), Expect = 6e-53
Identities = 152/166 (91%), Gaps = 2/166 (1%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactcattca 82
Query: 61 tccaaatgctgagtagtgatactcttaaagatactcatcaaatgagtgaatgatgcggga 120
|||||||| ||||| || | | |||| ||||||| || |||||||||||||||||||
Sbjct: 83 tccaaatgttgagt-gtaag-cgaataaatatactcagcagatgagtgaatgatgcggga 140
Query: 121 gacaaattgattcttaagtttcctgtacttggactgaagggagctc 166
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 141 gacaaattgaatcttaagtttcctgtacttggactgaagggagctc 186
>40465_gma-MIR319b:mirbase
Length = 208
Score = 194 bits (98), Expect = 1e-50
Identities = 153/168 (91%), Gaps = 5/168 (2%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgactcattc 59
||||||||||||||||||| || |||| || ||||||| |||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactcattc 82
Query: 60 atccaaatgctgagtagtgata-ctcttaaagatactcatcaaatgagtgaatgatgcgg 118
||||||||||||||| || | | ||||||||||| ||||||||||||||||||||
Sbjct: 83 atccaaatgctgagt---gaaagcgaagaaagatactcagcaaatgagtgaatgatgcgg 139
Query: 119 gagacaaattgattcttaagtttcctgtacttggactgaagggagctc 166
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gagacaaattgattcttaagtttcctgtacttggactgaagggagctc 187
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 159 bits (80), Expect = 8e-40
Identities = 148/168 (88%), Gaps = 2/168 (1%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgactcattc 59
|||||||||| ||||||||||| |||| || ||||||| ||||||||||| |||||||||
Sbjct: 6 gagctttctttagtccactcatgggtgacaataagatttcaattagctgctgactcattc 65
Query: 60 atccaaatgctgagtagtg-atactcttaaagatactcatcaaatgagtgaatgatgcgg 118
||||||||| |||||| ||| | | ||||||||||||||||||||||||||||
Sbjct: 66 atccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatgatgcgg 125
Query: 119 gagacaaattgattcttaagtttcctgtacttggactgaagggagctc 166
|||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 126 gagacaaattgaatcttaagtttcctatacttggactgaagggagctc 173
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 135 bits (68), Expect = 1e-32
Identities = 144/167 (86%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
|||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactcattca 72
Query: 61 tccaaatgctgagtagtgatactcttaaagat-actcatcaaatgagtgaatgatgcggg 119
||||||| |||||| | | | |||| || || ||||||||||||||||||||
Sbjct: 73 tccaaatactgagt--taaaggacaaggagattacccagtaaatgagtgaatgatgcggg 130
Query: 120 agacaaattgattcttaagtttcctgtacttggactgaagggagctc 166
||||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 131 agacaaattgaatcctaagcttcctgtacttggactgaagggagctc 177
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 121 bits (61), Expect = 2e-28
Identities = 140/167 (83%), Gaps = 12/167 (7%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
|||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactcattca 72
Query: 61 tccaaatgctgagtagtgatactcttaaaga-tactcatcaaatgagtgaatgatgcggg 119
||||||| ||| | |||| || ||| || |||||| |||||||||||||
Sbjct: 73 tccaaatactg-----------tgttaaggactacccagtaaatgattgaatgatgcggg 121
Query: 120 agacaaattgattcttaagtttcctgtacttggactgaagggagctc 166
|||||||||| ||||||| | ||||| |||||||||||||||||||
Sbjct: 122 agacaaattggatcttaagctccctgtgcttggactgaagggagctc 168
>41282_ctr-MIR319:mirbase
Length = 186
Score = 119 bits (60), Expect = 7e-28
Identities = 142/167 (85%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
||||||||||| ||||||| || ||||||| || |||| |||||||||| ||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggatttaattagctgctgactcattca 69
Query: 61 tccaaatgctgagtagtgatactcttaaag-atactcatcaaatgagtgaatgatgcggg 119
||||||| || |||| | || || | |||| || ||||||||||||||||||||
Sbjct: 70 tccaaatacttagtaaaggg--tcgaaatggatacccagtaaatgagtgaatgatgcggg 127
Query: 120 agacaaattgattcttaagtttcctgtacttggactgaagggagctc 166
||||||||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 128 agacaaattgaatcttaagcttcctgtgcttggactgaagggagctc 174
>40367_rco-MIR319a:mirbase
Length = 211
Score = 117 bits (59), Expect = 3e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 137 aaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaag 196
Query: 160 ggagctc 166
|||||||
Sbjct: 197 ggagctc 203
Score = 107 bits (54), Expect = 3e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
|||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||||||
Sbjct: 7 gagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcattca 66
Query: 61 tccaaatgctgagt 74
||||||| ||||||
Sbjct: 67 tccaaatactgagt 80
>41185_aqc-MIR319:mirbase
Length = 177
Score = 87.7 bits (44), Expect = 2e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
||||| |||||||||||||||||||| | ||| |||||||||| ||||||||||||||||
Sbjct: 4 gagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcattca 63
Query: 61 tcca 64
||||
Sbjct: 64 tcca 67
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
|||||| |||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||
Sbjct: 106 aaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactgaag 165
Query: 160 ggagctc 166
|||||||
Sbjct: 166 ggagctc 172
>41544_sly-MIR319:mirbase
Length = 168
Score = 75.8 bits (38), Expect = 9e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 94 ctcatcaaatgagtgaatgatgcgggag-acaaattgattcttaagtttcctgtacttgg 152
|||| ||| ||||||||||| ||||||| |||| |||| |||| || |||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 153 actgaagggagctc 166
||||||||||||||
Sbjct: 154 actgaagggagctc 167
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
|||||| ||| |||||||||||||||||| | |||||| ||||| | |||||||||||
Sbjct: 108 aaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggactgaag 167
Query: 160 ggagctc 166
|||||||
Sbjct: 168 ggagctc 174
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
||||||| ||| ||||||| |||| | | | || |||| |||||| | ||||||||||||
Sbjct: 13 gagcttttttcggtccacttatagatagtaatatgatttaattagttaccgactcattca 72
Query: 61 tccaaatgctgagt 74
||||||| ||||||
Sbjct: 73 tccaaatactgagt 86
>40070_ath-MIR319b:mirbase
Length = 172
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 103 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 162
Query: 160 ggagctc 166
|||||||
Sbjct: 163 ggagctc 169
>39859_aly-MIR319b:mirbase
Length = 246
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 142 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 201
Query: 160 ggagctc 166
|||||||
Sbjct: 202 ggagctc 208
>40069_ath-MIR319a:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 35 gattcaattagctgccgactcattcatccaaat 67
||||||||||||| |||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
>39858_aly-MIR319a:mirbase
Length = 221
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 39 caattagctgccgactcattcatccaaat 67
||||||||| |||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattg 129
|||||| |||||||||||| ||||||||||
Sbjct: 128 aaatgaatgaatgatgcggtagacaaattg 157
>42781_zma-MIR319b:mirbase
Length = 213
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aattagctgccgactcattcatccaaatgc 69
||||||||||||||||||||| ||| ||||
Sbjct: 63 aattagctgccgactcattcacccacatgc 92
>42563_sbi-MIR319:mirbase
Length = 249
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aattagctgccgactcattcatccaaatgc 69
||||||||||||||||||||| ||| ||||
Sbjct: 75 aattagctgccgactcattcacccacatgc 104
>41995_osa-MIR319b:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aattagctgccgactcattcatccaaatgc 69
||||||||||||||||||||| ||| ||||
Sbjct: 53 aattagctgccgactcattcacccacatgc 82
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 attagctgccgactcattcatccaaa 66
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctc 166
|||| |||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctc 179
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 aattagctgccgactcattcat 61
||||||||||||||||||||||
Sbjct: 55 aattagctgccgactcattcat 76
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctc 166
|||| |||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctc 191
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 attagctgccgactcattcatccaaa 66
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctc 166
|||| |||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctc 182
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcat 22
||||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcat 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 attagctgccgactcattcatccaaa 66
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 101 aatgagtgaatgatgcgggagacaaatt 128
|||| ||||||||||||||||| |||||
Sbjct: 119 aatgtgtgaatgatgcgggagataaatt 146
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctc 166
|||| |||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctc 185
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 41 attagctgccgactcattcatccaaatgc 69
|||||||||||||||||||| ||| ||||
Sbjct: 63 attagctgccgactcattcacccacatgc 91
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctc 166
|||| |||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctc 193
>40369_rco-MIR319c:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 101 aatgagtgaatgatgcgggagacaaatt 128
|||| ||||||||||||||||| |||||
Sbjct: 114 aatgtgtgaatgatgcgggagataaatt 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctc 166
|||| |||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctc 180
