miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41086_tcc-MIR156g:mirbase
          Length = 120

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 65/75 (86%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgtgc 60
          |||||||||||||||||| |||||||| || ||||| ||||||    |||||||| ||||
Sbjct: 24 cagaagagagtgagcacacagaggcacttg-tataagtctatacttttgcttttgcgtgc 82

                         
Query: 61 tcactactctttctg 75
          ||||| |||||||||
Sbjct: 83 tcacttctctttctg 97




>40331_rco-MIR156b:mirbase
          Length = 92

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 65/75 (86%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagaagagagtgagcacaaagaggcacatgatataactctatatcactgcttttgtgtgc 60
          |||||||||||||||||| |||||||  || ||||| |||||| |  |||||||| ||||
Sbjct: 9  cagaagagagtgagcacacagaggcatttg-tataaatctatacccttgcttttgcgtgc 67

                         
Query: 61 tcactactctttctg 75
          ||||| |||||||||
Sbjct: 68 tcacttctctttctg 82




>41290_ptc-MIR156c:mirbase
          Length = 100

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 65/76 (85%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagaagagagtgagcacaaagaggcaca-tgatataactctatatcactgcttttgtgtg 59
          |||||||||||||||||| ||||||| | |  ||||| |||||| || |||||||| |||
Sbjct: 14 cagaagagagtgagcacacagaggcatatttgtataaatctataccattgcttttgcgtg 73

                          
Query: 60 ctcactactctttctg 75
          |||||| ||| |||||
Sbjct: 74 ctcacttctcattctg 89




>41562_vvi-MIR156b:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  cagaagagagtgagcacaaagaggca 26
          |||||||||||||||||| |||||||
Sbjct: 14 cagaagagagtgagcacacagaggca 39




>41292_ptc-MIR156e:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  cagaagagagtgagcacaaagaggca 26
          |||||||||||||||||| |||||||
Sbjct: 14 cagaagagagtgagcacacagaggca 39




>40004_ath-MIR156c:mirbase
          Length = 104

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 1  cagaagagagtgagcacaaagaggcac 27
          |||||||||||||||||| | ||||||
Sbjct: 15 cagaagagagtgagcacacaaaggcac 41




>39792_aly-MIR156c:mirbase
          Length = 102

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 1  cagaagagagtgagcacaaagaggcac 27
          |||||||||||||||||| | ||||||
Sbjct: 14 cagaagagagtgagcacacaaaggcac 40