miRNEST 2.0, an integrative microRNA resource :: BLAST
>40337_rco-MIR156h:mirbase
Length = 97
Score = 101 bits (51), Expect = 7e-23
Identities = 74/80 (92%), Gaps = 5/80 (6%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatt--tttggattctgcatctcactcct 58
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 10 cagaagatagagagcacagatgatgatgtgcaatgacttt---ttctgcatctcactcct 66
Query: 59 ttgtgctctctatgcttctg 78
||||||||||||||||||||
Sbjct: 67 ttgtgctctctatgcttctg 86
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 97.6 bits (49), Expect = 1e-21
Identities = 71/78 (91%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactccttt 60
||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||
Sbjct: 15 cagaagatagagagcacagatgatgatatgcaat----ggactctgcatcccactccttt 70
Query: 61 gtgctctctatgcttctg 78
||||||||||||||||||
Sbjct: 71 gtgctctctatgcttctg 88
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 87.7 bits (44), Expect = 1e-18
Identities = 70/78 (89%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactccttt 60
||||||||||||||||||||||||||| |||| | || ||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatgatatgca---tggagagtctgcatctcactccttt 60
Query: 61 gtgctctctatgcttctg 78
||||||||||||||||||
Sbjct: 61 gtgctctctatgcttctg 78
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactccttt 60
|||||||||||||||||||||||||||||||| |||| | ||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatgatgtgca-----tggagtttgcatctcactccttt 69
Query: 61 gtgctctcta 70
||||||||||
Sbjct: 70 gtgctctcta 79
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/78 (87%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactccttt 60
||||||||||||||||||||||||| | |||| | || |||| |||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatgttttgcagta----gactctggatctcactccttt 70
Query: 61 gtgctctctatgcttctg 78
||||||||||||||||||
Sbjct: 71 gtgctctctatgcttctg 88
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%), Gaps = 5/78 (6%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactccttt 60
|||||||||||||||||||||||||| ||||| ||| | |||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatgaaatgcaa-----ggagccagcatctcactccttt 69
Query: 61 gtgctctctatgcttctg 78
||||||||||| ||||||
Sbjct: 70 gtgctctctattcttctg 87
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%), Gaps = 5/78 (6%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactccttt 60
|||||||||||||||||||||||||| |||| |||| |||||| ||||||||||
Sbjct: 25 cagaagatagagagcacagatgatgagatgca-----tggagcctgcatttcactccttt 79
Query: 61 gtgctctctatgcttctg 78
||||||||||| ||||||
Sbjct: 80 gtgctctctattcttctg 97
>41076_gra-MIR157a:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatt 35
||||||||||||||||||||||||| |||||||||
Sbjct: 9 cagaagatagagagcacagatgatggtgtgcaatt 43
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctctatgcttctg 78
|||||| |||||||||||||||| ||||||||||
Sbjct: 60 tgcatcccactcctttgtgctctttatgcttctg 93
>41077_gra-MIR157b:mirbase
Length = 91
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctctatgcttctg 78
|||||| |||||||||||||||||||||||||||
Sbjct: 50 tgcatcccactcctttgtgctctctatgcttctg 83
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctctatgcttctg 78
||||| ||||||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctg 164
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgca 32
||||||||||||||||||||||||||| ||||
Sbjct: 10 cagaagatagagagcacagatgatgatatgca 41
>40336_rco-MIR156g:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 2e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactccttt 60
||||||||||||||||| || ||||| |||| | | ||| ||||||||||||||||||
Sbjct: 10 cagaagatagagagcactgacgatgaaatgca-tgatgggactctgcatctcactccttt 68
Query: 61 gtgctctcta 70
||||||||||
Sbjct: 69 gtgctctcta 78
>40428_gma-MIR156d:mirbase
Length = 151
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgca 32
||||||||||||||||||||||||||| ||||
Sbjct: 25 cagaagatagagagcacagatgatgatatgca 56
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctctatgcttctg 78
||||||| ||||||||||||||||||| ||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctg 128
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctcta 70
||||||||||||||||||||||||||
Sbjct: 58 tgcatctcactcctttgtgctctcta 83
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatga 40
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctcta 70
||||||||||||||||||||||||||
Sbjct: 58 tgcatctcactcctttgtgctctcta 83
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 52.0 bits (26), Expect = 6e-08
Identities = 65/78 (83%), Gaps = 5/78 (6%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactccttt 60
||||||||||||||||||||||| || |||| |||| | |||||||| | ||||
Sbjct: 4 cagaagatagagagcacagatgacgaattgca-----tggagtttgcatctcgatacttt 58
Query: 61 gtgctctctatgcttctg 78
||||||||||||||||||
Sbjct: 59 gtgctctctatgcttctg 76
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcacagatgatga 35
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 46 gcatctcactcctttgtgctctctatgcttctg 78
|||||||| ||||||||||||| ||| ||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctg 86
>40010_ath-MIR157a:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 8 cagaagatagagagcacagatgatga 33
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctcta 70
||||||| ||||||||||||||||||
Sbjct: 57 tgcatcttactcctttgtgctctcta 82
>39799_aly-MIR157b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctctatgcttctg 78
||||||| |||||||||||||||||| |||||||
Sbjct: 57 tgcatcttactcctttgtgctctctaagcttctg 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatga 23
|||||||||||||||||||||||
Sbjct: 8 cagaagatagagagcacagatga 30
>40429_gma-MIR156e:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 gcatctcactcctttgtgctctcta 70
|||||||||||||||||||||||||
Sbjct: 69 gcatctcactcctttgtgctctcta 93
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||| ||||||||
Sbjct: 25 cagaagatagagagcactgatgatga 50
>40011_ath-MIR157b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgat 24
||||||||||||||||||||||||
Sbjct: 23 cagaagatagagagcacagatgat 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctcta 70
||||||| ||||||||||||||||||
Sbjct: 72 tgcatcttactcctttgtgctctcta 97
>39798_aly-MIR157a:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgat 24
||||||||||||||||||||||||
Sbjct: 20 cagaagatagagagcacagatgat 43
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 tgcatctcactcctttgtgctctcta 70
||||||| ||||||||||||||||||
Sbjct: 69 tgcatcttactcctttgtgctctcta 94
>41525_sly-MIR156a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctg 96
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 5 cagaagatagagagcactaatgatgat 31
>40013_ath-MIR157d:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 6e-05
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 43 tctgcatctc-actcctttgtgctctctatgcttctg 78
|||||||||| | |||| |||||||||||||||||||
Sbjct: 154 tctgcatctctattcctatgtgctctctatgcttctg 190
>39801_aly-MIR157d:mirbase
Length = 256
Score = 42.1 bits (21), Expect = 6e-05
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 43 tctgcatctc-actcctttgtgctctctatgcttctg 78
|||||||||| | |||| |||||||||||||||||||
Sbjct: 172 tctgcatctctattcctatgtgctctctatgcttctg 208
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgat 24
||||||||||||||||||| ||||
Sbjct: 28 cagaagatagagagcacaggtgat 51
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgca 32
|||||||||||||||||| | |||||| ||||
Sbjct: 27 cagaagatagagagcacaaaagatgatatgca 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 tcctttgtgctctctatgcttctg 78
|||||||||||||||| |||||||
Sbjct: 86 tcctttgtgctctctaagcttctg 109
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgatgtgca 32
|||||||||||||||||| | |||||| ||||
Sbjct: 27 cagaagatagagagcacaaaagatgatatgca 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 tcctttgtgctctctatgcttctg 78
|||||||||||||||| |||||||
Sbjct: 86 tcctttgtgctctctaagcttctg 109
>40012_ath-MIR157c:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 2e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 44 ctgcatctc-actcctttgtgctctctatgcttctg 78
||||||||| |||| |||||||||||||| ||||||
Sbjct: 150 ctgcatctctactcttttgtgctctctatacttctg 185
>39800_aly-MIR157c:mirbase
Length = 293
Score = 40.1 bits (20), Expect = 2e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 44 ctgcatctc-actcctttgtgctctctatgcttctg 78
||||||||| |||| |||||||||||||| ||||||
Sbjct: 201 ctgcatctctactcttttgtgctctctatacttctg 236
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacaga 34
