miRNEST 2.0, an integrative microRNA resource :: BLAST
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 19 gatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaatacga 78
Query: 61 tctcagattgagccgcgccaatatc 85
|||||||||||||||||||||||||
Sbjct: 79 tctcagattgagccgcgccaatatc 103
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 107 bits (54), Expect = 1e-24
Identities = 78/85 (91%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||| || || ||| |||||||||||
Sbjct: 6 gatgttggtgaggttcaatccgaagacggatttac--atgtatagagttgtaaaatacga 63
Query: 61 tctcagattgagccgcgccaatatc 85
|||||||||||||||||||||||||
Sbjct: 64 tctcagattgagccgcgccaatatc 88
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 89.7 bits (45), Expect = 3e-19
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 11 gatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacga 70
Query: 61 tctcagattgagccgcgccaatatc 85
|||||||||||||||||||||||||
Sbjct: 71 tctcagattgagccgcgccaatatc 95
>40365_rco-MIR171g:mirbase
Length = 89
Score = 87.7 bits (44), Expect = 1e-18
Identities = 75/85 (88%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||| |||| || ||||| ||||
Sbjct: 4 gatgttggtgaggttcaatccgaagacggatttac----acattctgttgtaaaggacga 59
Query: 61 tctcagattgagccgcgccaatatc 85
|||||||||||||||||||||||||
Sbjct: 60 tctcagattgagccgcgccaatatc 84
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 83.8 bits (42), Expect = 2e-17
Identities = 74/85 (87%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
|||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 12 gatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacga 65
Query: 61 tctcagattgagccgcgccaatatc 85
|||| ||||||||||||||||||||
Sbjct: 66 tctctgattgagccgcgccaatatc 90
>41541_sly-MIR171d:mirbase
Length = 112
Score = 69.9 bits (35), Expect = 3e-13
Identities = 74/85 (87%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
|||||||||||||||||||||||||||| ||||| | | ||| ||||||| ||||
Sbjct: 12 gatgttggtgaggttcaatccgaagacgaatttatg--cttatt--ttcgtaaagaacga 67
Query: 61 tctcagattgagccgcgccaatatc 85
|||||||||||||||||||||||||
Sbjct: 68 tctcagattgagccgcgccaatatc 92
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 50 gtaaaatacgatctcagattgagccgcgccaatatc 85
||||||| ||||||||||||||||||||||||||||
Sbjct: 56 gtaaaatccgatctcagattgagccgcgccaatatc 91
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttac 35
||||||||||||||||||||||||||| |||||||
Sbjct: 11 gatgttggtgaggttcaatccgaagacagatttac 45
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 gatctcagattgagccgcgccaatatc 85
|||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatc 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaaga 26
|||||||||||||||||||| |||||
Sbjct: 12 gatgttggtgaggttcaatctgaaga 37
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 ctcagattgagccgcgccaatatc 85
||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatc 84
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tcagattgagccgcgccaatatc 85
|||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatc 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaaga 26
|||||||||||||||||||| |||||
Sbjct: 21 gatgttggtgaggttcaatctgaaga 46
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tcagattgagccgcgccaatatc 85
|||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatc 83
>39739_smo-MIR171d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 61 tctcagattgagccgcgccaatatc 85
||||| |||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatc 89
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 4 ttggtgaggttcaatccga 22
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatc 103
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 3 ttggtgaggttcaatccga 21
>41981_osa-MIR171a:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 14 ttggtgaggttcaatccga 32
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41540_sly-MIR171c:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatc 98
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41231_csi-MIR171a:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>41211_ccl-MIR171:mirbase
Length = 321
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatc 142
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
