miRNEST 2.0, an integrative microRNA resource :: BLAST
>41063_ghr-MIR399d:mirbase
Length = 98
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 cagggcaactctccttaagcaaaaatggatgtgcttttctttgcataattcgattttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cagggcaactctccttaagcaaaaatggatgtgcttttctttgcataattcgattttgcc 70
Query: 61 aaaggagatttgccctg 77
|||||||||||||||||
Sbjct: 71 aaaggagatttgccctg 87
>40739_mtr-MIR399i:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccctg 77
|||||||||||||||||||||||
Sbjct: 63 tttgccaaaggagatttgccctg 85
>40738_mtr-MIR399h:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccctg 77
|||||||||||||||||||||||
Sbjct: 63 tttgccaaaggagatttgccctg 85
>40733_mtr-MIR399c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccctg 77
|||||||||||||||||||||||
Sbjct: 78 tttgccaaaggagatttgccctg 100
>41151_tcc-MIR399f:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 44 cataattcgattttgccaaaggagatttgccctg 77
|||| ||| ||||||||| |||||||||||||||
Sbjct: 58 catagttctattttgccagaggagatttgccctg 91
>41892_hvu-MIR399:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccc 75
|||||||||||||||||||||
Sbjct: 100 tttgccaaaggagatttgccc 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgcc 74
||||||||||||||||||||
Sbjct: 19 tttgccaaaggagatttgcc 38
>40092_ath-MIR399a:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccctg 77
|||||||||||||||||||||
Sbjct: 93 tgccaaaggagatttgccctg 113
>39889_aly-MIR399f:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccctg 77
|||||||||||||||||||||
Sbjct: 112 tgccaaaggagatttgccctg 132
>41675_vvi-MIR399h:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 ttttgccaaaggagatttgccctg 77
||||||||||||||| ||||||||
Sbjct: 57 ttttgccaaaggagaattgccctg 80
>41453_ptc-MIR399f:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 ttttgccaaaggagatttgccctg 77
||||||||||||||| ||||||||
Sbjct: 69 ttttgccaaaggagaattgccctg 92
>41152_tcc-MIR399g:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 ttttgccaaaggagatttgccctg 77
||||||||||||||| ||||||||
Sbjct: 69 ttttgccaaaggagaattgccctg 92
>39893_aly-MIR399j:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ttgccaaaggagatttgccc 75
||||||||||||||||||||
Sbjct: 95 ttgccaaaggagatttgccc 114
>39891_aly-MIR399h:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ttgccaaaggagatttgccc 75
||||||||||||||||||||
Sbjct: 81 ttgccaaaggagatttgccc 100
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 81 tgccaaaggagatttgccc 99
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 87 tgccaaaggagatttgccc 105
>42047_osa-MIR399g:mirbase
Length = 119
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 89 tgccaaaggagatttgccc 107
>42046_osa-MIR399f:mirbase
Length = 117
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 87 tgccaaaggagatttgccc 105
>42045_osa-MIR399e:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 88 tgccaaaggagatttgccc 106
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 83 tgccaaaggagatttgccc 101
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 82 tgccaaaggagatttgccc 100
>41458_ptc-MIR399k:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgc 73
|||||||||||||||||||
Sbjct: 64 tttgccaaaggagatttgc 82
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 97 tgccaaaggagatttgccc 115
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 97 tgccaaaggagatttgccc 115
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 91 tgccaaaggagatttgccc 109
>41250_csi-MIR399e:mirbase
Length = 154
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccctg 77
|||||||||||||| ||||||||
Sbjct: 16 tttgccaaaggagaattgccctg 38
>41248_csi-MIR399c:mirbase
Length = 149
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccctg 77
|||||||||||||| ||||||||
Sbjct: 107 tttgccaaaggagaattgccctg 129
>41246_csi-MIR399a:mirbase
Length = 155
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 114 tgccaaaggagatttgccc 132
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 59 ccaaaggagatttgccctg 77
|||||||||||||||||||
Sbjct: 39 ccaaaggagatttgccctg 21
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 77 tgccaaaggagatttgccc 95
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 96 tgccaaaggagatttgccc 114
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 95 tgccaaaggagatttgccc 113
>40741_mtr-MIR399k:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tttgccaaaggagatttgccctg 77
|||||||||| ||||||||||||
Sbjct: 67 tttgccaaagaagatttgccctg 89
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 79 tgccaaaggagatttgccc 97
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 79 tgccaaaggagatttgccc 97
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 95 tgccaaaggagatttgccc 113
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 95 tgccaaaggagatttgccc 113
>40387_rco-MIR399e:mirbase
Length = 108
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 83 tgccaaaggagatttgccc 101
>40385_rco-MIR399c:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 71 tgccaaaggagatttgccc 89
>40384_rco-MIR399b:mirbase
Length = 106
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 81 tgccaaaggagatttgccc 99
>40299_bna-MIR399:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 81 tgccaaaggagatttgccc 99
>40097_ath-MIR399f:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 88 tgccaaaggagatttgccc 106
>40095_ath-MIR399d:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 70 tgccaaaggagatttgccc 88
>39892_aly-MIR399i:mirbase
Length = 127
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 92 tgccaaaggagatttgccc 110
>39890_aly-MIR399g:mirbase
Length = 157
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 111 tgccaaaggagatttgccc 129
>39887_aly-MIR399d:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 84 tgccaaaggagatttgccc 102
>39884_aly-MIR399a:mirbase
Length = 162
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 57 tgccaaaggagatttgccc 75
|||||||||||||||||||
Sbjct: 113 tgccaaaggagatttgccc 131
