miRNEST 2.0, an integrative microRNA resource :: BLAST
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcaatttcatgtaatcagatcattcattcattcgttgtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcaatttcatgtaatcagatcattcattcattcgttgtcg 70
Query: 61 ttgatggtgctgcatatatacgagtacgttgttgcggttcaataaagctgtggga 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ttgatggtgctgcatatatacgagtacgttgttgcggttcaataaagctgtggga 125
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 204 bits (103), Expect = 1e-53
Identities = 112/115 (97%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcaatttcatgtaatcagatcattcattcattcgttgtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11 ttccacagctttcttgaactgcaatttcatgtaatcagatcattcattcattcattgtcg 70
Query: 61 ttgatggtgctgcatatatacgagtacgttgttgcggttcaataaagctgtggga 115
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ttgatggtgttgcatacatacgagtacgttgttgcggttcaataaagctgtggga 125
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 89 ttgttgcggttcaataaagctgtggga 115
|||||||||||||||||||||||||||
Sbjct: 89 ttgttgcggttcaataaagctgtggga 115
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41242_csi-MIR396b:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 89 ttgttgcggttcaataaagctgtggga 115
|||||||||||||||||||||||||||
Sbjct: 79 ttgttgcggttcaataaagctgtggga 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaactgca 42
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 78 atacgagtacgttgttgcggttcaataaagctgtggga 115
||||| ||| |||||||| |||||||||||||||||||
Sbjct: 94 atacgggtatgttgttgcagttcaataaagctgtggga 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgc 22
||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgc 42
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 91 gttgcggttcaataaagctgtggga 115
|||||||||||||||||||||||||
Sbjct: 84 gttgcggttcaataaagctgtggga 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 ttgcggttcaataaagctgtggga 115
||||||||||||||||||||||||
Sbjct: 97 ttgcggttcaataaagctgtggga 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 ttgcggttcaataaagctgtggga 115
||||||||||||||||||||||||
Sbjct: 67 ttgcggttcaataaagctgtggga 90
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaactgca 28
>40646_lja-MIR396:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 ttgcggttcaataaagctgtggga 115
||||||||||||||||||||||||
Sbjct: 71 ttgcggttcaataaagctgtggga 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaactgca 38
>40473_gma-MIR396a:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 ttgcggttcaataaagctgtggga 115
||||||||||||||||||||||||
Sbjct: 98 ttgcggttcaataaagctgtggga 121
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
>40085_ath-MIR396a:mirbase
Length = 151
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcaa 24
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcaa 34
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 ttgcggttcaataaagctgtggga 115
||||||||||||||||||||||||
Sbjct: 118 ttgcggttcaataaagctgtggga 141
>39877_aly-MIR396a:mirbase
Length = 172
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcaa 24
||||||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaactgcaa 47
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 ttgcggttcaataaagctgtggga 115
||||||||||||||||||||||||
Sbjct: 128 ttgcggttcaataaagctgtggga 151
>42814_zma-MIR396h:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaactgca 76
>42813_zma-MIR396g:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaactgca 89
>42808_zma-MIR396b:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
>42807_zma-MIR396a:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
>42472_ssp-MIR396:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>42461_sof-MIR396:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
>42027_osa-MIR396b:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>42026_osa-MIR396a:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgca 55
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 93 tgcggttcaataaagctgtggga 115
|||||||||||||||||||||||
Sbjct: 102 tgcggttcaataaagctgtggga 124
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgc 22
||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgc 54
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31
>41241_csi-MIR396a:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41
>40477_gma-MIR396e:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaactg 27
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32
>41212_ccl-MIR396:mirbase
Length = 277
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaact 162
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40296_bna-MIR396a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>40086_ath-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39878_aly-MIR396b:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
>39379_pab-MIR396a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
