miRNEST 2.0, an integrative microRNA resource :: BLAST
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 321 bits (162), Expect = 1e-88
Identities = 169/170 (99%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 tcccacagccctatcccgtcaat-gggggcattggataggcttgtggcttgcatatctca 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 70 tcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctca 129
Query: 120 ggagctgcattatccaagtttagatccttgtttggattgaagggagctct 169
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggagctgcattatccaagtttagatccttgtttggattgaagggagctct 179
>40338_rco-MIR159:mirbase
Length = 180
Score = 125 bits (63), Expect = 1e-29
Identities = 147/171 (85%), Gaps = 3/171 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 tcccacagccctat-cccgtcaatgggggcattggataggcttgtggcttgcatatctca 119
|||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct: 65 tcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctca 124
Query: 120 ggagctgcattatccaagt-ttagatccttgtttggattgaagggagctct 169
|||||| ||||| || || |||||||||||||||||||||||||||||||
Sbjct: 125 ggagcttcatta-ccttgtattagatccttgtttggattgaagggagctct 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 93.7 bits (47), Expect = 4e-20
Identities = 142/171 (83%), Gaps = 7/171 (4%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
||||||||||||||||||||||| | || | |||||||||| |||||||||| |||| |
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 tcccacagccctatc-ccgtcaatgggggca-ttggataggcttgtggcttgcatatctc 118
||||||||||||||| || ||| | || || ||| ||| || ||||||||||||||
Sbjct: 72 tcccacagccctatcaccatca-----gtcattttgatgggcctgcggcttgcatatctc 126
Query: 119 aggagctgcattatccaagtttagatccttgtttggattgaagggagctct 169
||||||| |||| | || ||||||| || ||||||||||||||||||||
Sbjct: 127 aggagctttattacctaatgttagatctttttttggattgaagggagctct 177
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 87.7 bits (44), Expect = 2e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
|||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 143 atccttgtttggattgaagggagctct 169
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 87.7 bits (44), Expect = 2e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
|||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 143 atccttgtttggattgaagggagctct 169
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>40397_ahy-MIR159:mirbase
Length = 197
Score = 87.7 bits (44), Expect = 2e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
||||||||||||||||||| |||||||||| |||||||||||||||||| | ||||||
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 tcccacag 68
||||||||
Sbjct: 64 tcccacag 71
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 141 agatccttgtttggattgaagggagctct 169
|||||||| ||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctct 176
>40432_gma-MIR159a:mirbase
Length = 214
Score = 79.8 bits (40), Expect = 6e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
|||||||||||||||||||| |||| ||||||||||| ||||||||||| | ||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 tcccacag 68
||||||||
Sbjct: 82 tcccacag 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 ccttgtttggattgaagggagctct 169
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 77.8 bits (39), Expect = 2e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
||||||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcc 63
|||
Sbjct: 72 tcc 74
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 77.8 bits (39), Expect = 2e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
||||||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcc 63
|||
Sbjct: 72 tcc 74
>41218_csi-MIR159:mirbase
Length = 216
Score = 61.9 bits (31), Expect = 1e-10
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttact-gggtagattgagctgctgacttatgg 59
||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| |||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 atcccacagccctat 74
||||||||| |||||
Sbjct: 73 atcccacagtcctat 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatat 115
||||||||||||||||||||||
Sbjct: 125 gataggcttgtggcttgcatat 146
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctct 205
>41528_sly-MIR159:mirbase
Length = 177
Score = 54.0 bits (27), Expect = 3e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 60
||||||||||||||||||| | | ||| || || || |||||||||||||| ||||||
Sbjct: 2 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 61
Query: 61 tcccacagccctatc 75
| || ||||||||||
Sbjct: 62 ttcctcagccctatc 76
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
>39804_aly-MIR159a:mirbase
Length = 222
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tggcttgcatatctcaggagct 125
||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagct 151
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctct 202
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 93 ggataggcttgtggcttgcatatctcaggagctgcat 129
|||||||||| |||||||||| | ||||||||||||
Sbjct: 174 ggataggcttatggcttgcatgccccaggagctgcat 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 93 ggataggcttgtggcttgcatatctcaggagctgcat 129
|||||||||| |||||||||| | ||||||||||||
Sbjct: 186 ggataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 93 ggataggcttgtggcttgcatatctcaggagctgcat 129
|||||||||| |||||||||| | ||||||||||||
Sbjct: 186 ggataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
