miRNEST 2.0, an integrative microRNA resource :: BLAST
>41528_sly-MIR159:mirbase
Length = 177
Score = 333 bits (168), Expect = 3e-92
Identities = 175/176 (99%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 61
Query: 61 ttcctcagccctatctatttatgatttcaaacatatagataggtttgtgggtttgcatat 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 62 ttcctcagccctatctatttatgatttcaaacatatagataggttt-tgggtttgcatat 120
Query: 121 gtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctct 176
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 58.0 bits (29), Expect = 2e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 113 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 172
|||||||| |||||||||||||| ||| |||| |||| |||||||||||||||||||
Sbjct: 116 ttgcatatctcaggagctttatt--acctaatgttagatctttttttggattgaagggag 173
Query: 173 ctct 176
||||
Sbjct: 174 ctct 177
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 54.0 bits (27), Expect = 4e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 60
||||||||||||||||||| | | ||| || || || |||||||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 ttcctcagccctatc 75
| || ||||||||||
Sbjct: 70 tcccacagccctatc 84
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctct 176
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>41218_csi-MIR159:mirbase
Length = 216
Score = 46.1 bits (23), Expect = 9e-06
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacaaaaaatctaaca-ggttaaattgagctgctgacctatgg 59
||||||||||||||||||| | | |||| || || |||||||||||||||| ||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 attcctcagccctat 74
|| || ||| |||||
Sbjct: 73 atcccacagtcctat 87
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 ttttttggattgaagggagctct 176
|||||||||||||||||||||||
Sbjct: 183 ttttttggattgaagggagctct 205
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 40 attgagctgctgacctatggattcctcagccctat 74
||||||||||||| |||||||| || |||||||||
Sbjct: 44 attgagctgctgagctatggatcccacagccctat 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 54/64 (84%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 113 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 172
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 170
Query: 173 ctct 176
||||
Sbjct: 171 ctct 174
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 tttttggattgaagggagctct 176
||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctct 173
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 tttttggattgaagggagctct 176
||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctct 173
>40397_ahy-MIR159:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaca 21
|||||||||||||||||||||
Sbjct: 4 ggagctccttgaagtccaaca 24
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctct 176
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>42700_zma-MIR159k:mirbase
Length = 200
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctct 176
||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctct 198
