miRNEST 2.0, an integrative microRNA resource :: BLAST
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 325 bits (164), Expect = 6e-90
Identities = 167/168 (99%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctcaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctcag 130
Query: 121 gagctgcattatccaagtttagatccttgtttggattgaagggagctc 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gagctgcattatccaagtttagatccttgtttggattgaagggagctc 178
>40338_rco-MIR159:mirbase
Length = 180
Score = 105 bits (53), Expect = 1e-23
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 cccacagccctat 73
|||||||||||||
Sbjct: 66 cccacagccctat 78
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
||||||||||||||||||| |||| ||||||||||| |||||||||||| | |||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 atccttgtttggattgaagggagctc 168
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
||||||||||||||||||| |||| ||||||||||| |||||||||||| | |||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 atccttgtttggattgaagggagctc 168
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>40397_ahy-MIR159:mirbase
Length = 197
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||| |||||||||| |||||||||||||||||| | |||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 61 cccacag 67
|||||||
Sbjct: 65 cccacag 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 141 agatccttgtttggattgaagggagctc 168
|||||||| |||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctc 175
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 83.8 bits (42), Expect = 4e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||||||| | || | |||||||||| |||||||||| |||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacagccctatc 74
||||||||||||||
Sbjct: 73 cccacagccctatc 86
>40432_gma-MIR159a:mirbase
Length = 214
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
||||||||||||||||||| |||| ||||||||||| ||||||||||| | |||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacag 67
|||||||
Sbjct: 83 cccacag 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 145 ccttgtttggattgaagggagctc 168
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 75.8 bits (38), Expect = 9e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 75.8 bits (38), Expect = 9e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>41218_csi-MIR159:mirbase
Length = 216
Score = 60.0 bits (30), Expect = 6e-10
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttact-gggtagattgagctgctgacttatgga 59
|||||||||||||||||| ||||| ||| | ||||| ||||||||||||| ||||||
Sbjct: 14 gagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgga 73
Query: 60 tcccacagccctat 73
|||||||| |||||
Sbjct: 74 tcccacagtcctat 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatat 115
||||||||||||||||||||||
Sbjct: 125 gataggcttgtggcttgcatat 146
>41528_sly-MIR159:mirbase
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||| | | ||| || || || |||||||||||||| |||||||
Sbjct: 3 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 62
Query: 61 cccacagccctatc 74
|| ||||||||||
Sbjct: 63 tcctcagccctatc 76
>42700_zma-MIR159k:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctc 197
>42699_zma-MIR159j:mirbase
Length = 252
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctc 249
>42691_zma-MIR159b:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctc 200
>42634_tae-MIR159a:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctc 29
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctc 174
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 gtttggattgaagggagctc 168
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>39806_aly-MIR159c:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 gtttggattgaagggagctc 168
||||||||||||||||||||
Sbjct: 196 gtttggattgaagggagctc 215
