miRNEST 2.0, an integrative microRNA resource :: BLAST
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 283 bits (143), Expect = 2e-77
Identities = 157/164 (95%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctcaggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctcaggagc 132
Query: 121 tttattacctaatgttagatcnnnnnnnggattgaagggagctc 164
||||||||||||||||||||| ||||||||||||||||
Sbjct: 133 tttattacctaatgttagatctttttttggattgaagggagctc 176
>40338_rco-MIR159:mirbase
Length = 180
Score = 97.6 bits (49), Expect = 3e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
|||||||||||||||||||||| | || || ||||||||| |||||||||||||||| ||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 cccacagccctat 73
|||||||||||||
Sbjct: 66 cccacagccctat 78
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 83.8 bits (42), Expect = 4e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
|||||||||||||||||||||| | || | |||||||||| |||||||||| |||| ||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacagccctatc 74
||||||||||||||
Sbjct: 71 cccacagccctatc 84
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 83.8 bits (42), Expect = 4e-17
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 98 tgcggcttgcatatctcaggagctttattacctaatgttagatcnnnnnnnggattgaag 157
||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 106 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 165
Query: 158 ggagctc 164
|||||||
Sbjct: 166 ggagctc 172
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 83.8 bits (42), Expect = 4e-17
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 98 tgcggcttgcatatctcaggagctttattacctaatgttagatcnnnnnnnggattgaag 157
||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 106 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 165
Query: 158 ggagctc 164
|||||||
Sbjct: 166 ggagctc 172
>40397_ahy-MIR159:mirbase
Length = 197
Score = 69.9 bits (35), Expect = 6e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
|||||||||||||||||| ||| | || || ||||||||| |||||||| ||||||| ||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 61 cccacag 67
|||||||
Sbjct: 65 cccacag 71
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
||||||||||||||||||| || | || | |||||| ||| |||||||| ||||||| ||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
||||||||||||||||||| || | || | |||||| ||| |||||||| ||||||| ||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
>40432_gma-MIR159a:mirbase
Length = 214
Score = 54.0 bits (27), Expect = 3e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
||||||||||||||||||| || | || | |||||| || |||||||| ||||||| ||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacag 67
|||||||
Sbjct: 83 cccacag 89
>41218_csi-MIR159:mirbase
Length = 216
Score = 52.0 bits (26), Expect = 1e-07
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagctatgaa 59
|||||||||||||||||| ||| | || || ||||| || |||||||||||||||| |
Sbjct: 14 gagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgga 73
Query: 60 tcccacagccctat 73
|||||||| |||||
Sbjct: 74 tcccacagtcctat 87
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 101 ggcttgcatatctcaggagcttta 124
||||||||||||||||||||||||
Sbjct: 131 ggcttgcatatctcaggagcttta 154
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 ttgcatatctcaggagcttta 124
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>40311_bra-MIR159a:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 101 ggcttgcatatctcaggagcttta 124
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>40261_bna-MIR159:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 101 ggcttgcatatctcaggagcttta 124
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
