miRNEST 2.0, an integrative microRNA resource :: BLAST
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 83.8 bits (42), Expect = 4e-17
Identities = 151/180 (83%), Gaps = 13/180 (7%)
Strand = Plus / Plus
Query: 1 gagcttccttca-cccactcatgga--ggagaactggggttgaattagctgccgcctcat 57
|||||||||||| |||||||||||| |||||| ||||||||||||||||||| |||||
Sbjct: 14 gagcttccttcagcccactcatggataggagaaa-ggggttgaattagctgccgactcat 72
Query: 58 tcatccaaccactcagtagaaa----ggaataggttttgt---gctactgtgattgagtg 110
|||| ||| ||| ||||||||| ||||| | | || | ||||||||||||| |||
Sbjct: 73 tcattcaagcac-cagtagaaaaaggggaatggatattcttttgctactgtgattgtgtg 131
Query: 111 aatgatgcgggagatagttttctat-tcctctctttccttgcttggactgaagggagctc 169
|||||||||||||||| |||| || ||||| |||| |||||||||||||||||||||
Sbjct: 132 aatgatgcgggagataattttacatcccctctttttctgtgcttggactgaagggagctc 191
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 79.8 bits (40), Expect = 6e-16
Identities = 71/79 (89%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 93 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctc--tttccttg 150
|||||||||||||| ||||||||||||||||||| ||||| | ||||||| |||| ||
Sbjct: 116 tgctactgtgattgtgtgaatgatgcgggagataattttcca-tcctctccttttctgtg 174
Query: 151 cttggactgaagggagctc 169
|||||||||||||||||||
Sbjct: 175 cttggactgaagggagctc 193
>40369_rco-MIR319c:mirbase
Length = 188
Score = 52.0 bits (26), Expect = 1e-07
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 93 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 151
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
Query: 152 ttggactgaagggagctc 169
||||||||||||||||||
Sbjct: 163 ttggactgaagggagctc 180
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 37 ttgaattagctgccgcctcattcatccaa 65
||||||||||||||| |||||||||||||
Sbjct: 49 ttgaattagctgccgactcattcatccaa 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 tgcttggactgaagggagctc 169
|||||||||||||||||||||
Sbjct: 148 tgcttggactgaagggagctc 168
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 93 tgctactgtgattgagtgaatgatgcgggagata 126
||||| ||||| || |||||||||||||||||||
Sbjct: 109 tgctattgtgaatgtgtgaatgatgcgggagata 142
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 aattagctgccgcctcattcatccaa 65
|||||||||||| |||||||||||||
Sbjct: 52 aattagctgccgactcattcatccaa 77
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tgagtgaatgatgcgggaga 124
||||||||||||||||||||
Sbjct: 114 tgagtgaatgatgcgggaga 133
>40703_mtr-MIR319:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 ttgcttggactgaagggagctc 169
||||||||||||||||||||||
Sbjct: 165 ttgcttggactgaagggagctc 186
>40465_gma-MIR319b:mirbase
Length = 208
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 aattagctgccgcctcattcatccaa 65
|||||||||||| |||||||||||||
Sbjct: 63 aattagctgccgactcattcatccaa 88
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tgagtgaatgatgcgggaga 124
||||||||||||||||||||
Sbjct: 124 tgagtgaatgatgcgggaga 143
>40464_gma-MIR319a:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 aattagctgccgcctcattcatccaa 65
|||||||||||| |||||||||||||
Sbjct: 62 aattagctgccgactcattcatccaa 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tgagtgaatgatgcgggaga 124
||||||||||||||||||||
Sbjct: 123 tgagtgaatgatgcgggaga 142
>40367_rco-MIR319a:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 aattagctgccgcctcattcatccaa 65
|||||||||||| |||||||||||||
Sbjct: 46 aattagctgccgactcattcatccaa 71
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tgagtgaatgatgcgggaga 124
||||||||||||||||||||
Sbjct: 140 tgagtgaatgatgcgggaga 159
>42642_tae-MIR319:mirbase
Length = 211
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 tgcttggactgaagggagctc 169
|||||||||||||||||||||
Sbjct: 181 tgcttggactgaagggagctc 201
>41770_bdi-MIR319:mirbase
Length = 280
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 tgcttggactgaagggagctc 169
|||||||||||||||||||||
Sbjct: 223 tgcttggactgaagggagctc 243
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 ctactgtgattgagtgaatgatgcgggag 123
||||||||| || ||||||||||||||||
Sbjct: 105 ctactgtgaatgtgtgaatgatgcgggag 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 tgcttggactgaagggagctc 169
|||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctc 179
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 tgcttggactgaagggagctc 169
|||||||||||||||||||||
Sbjct: 162 tgcttggactgaagggagctc 182
>41282_ctr-MIR319:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 tgcttggactgaagggagctc 169
|||||||||||||||||||||
Sbjct: 154 tgcttggactgaagggagctc 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tgagtgaatgatgcgggaga 124
||||||||||||||||||||
Sbjct: 111 tgagtgaatgatgcgggaga 130
>40070_ath-MIR319b:mirbase
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 tgcttggactgaagggagctc 169
|||||||||||||||||||||
Sbjct: 149 tgcttggactgaagggagctc 169
>39859_aly-MIR319b:mirbase
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 tgcttggactgaagggagctc 169
|||||||||||||||||||||
Sbjct: 188 tgcttggactgaagggagctc 208
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 34 gggttgaattagctgccgcctcattcatccaa 65
||||| |||| ||||||| |||||||||||||
Sbjct: 33 gggttcaatttgctgccgactcattcatccaa 64
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 gcttggactgaagggagctc 169
||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctc 427
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tgagtgaatgatgcgggaga 124
||||||||||||||||||||
Sbjct: 110 tgagtgaatgatgcgggaga 129
>40071_ath-MIR319c:mirbase
Length = 199
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gtgaatgatgcgggagatagtttt 131
||||||||||||||||||| ||||
Sbjct: 127 gtgaatgatgcgggagatattttt 150
