miRNEST 2.0, an integrative microRNA resource :: BLAST
>40468_gma-MIR390a:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 36 tcttgatcttcatttgcgctatccatcctgagtt 69
||||||||||| |||||||||||||||||||||
Sbjct: 52 tcttgatcttctcttgcgctatccatcctgagtt 85
>40467_gma-MIR390a:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 36 tcttgatcttcatttgcgctatccatcctgagtt 69
||||||||||| |||||||||||||||||||||
Sbjct: 52 tcttgatcttctcttgcgctatccatcctgagtt 85
>40073_ath-MIR390b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggc 25
|||||||||||||||||||||||||
Sbjct: 16 agctcaggagggatagcgccatggc 40
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagtt 105
>41237_csi-MIR390:mirbase
Length = 154
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatgg 24
||||||||||||||||||||||||
Sbjct: 22 agctcaggagggatagcgccatgg 45
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 98 gcgctatccatcctgagtt 116
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatgg 24
||||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatgg 35
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagtt 105
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatgg 24
||||||||||||||||||||||||
Sbjct: 19 agctcaggagggatagcgccatgg 42
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 94 gcgctatccatcctgagtt 112
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatgg 24
||||||||||||||||||||||||
Sbjct: 16 agctcaggagggatagcgccatgg 39
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 91 gcgctatccatcctgagtt 109
>40705_mtr-MIR390:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 38 ttgatcttcatttgcgctatccatcctgagtt 69
||||||||| |||||||||||||||||||||
Sbjct: 63 ttgatcttctcttgcgctatccatcctgagtt 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccat 22
||||||||||||||||||||||
Sbjct: 7 agctcaggagggatagcgccat 28
>40372_rco-MIR390b:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatgg 24
||||||||||||||||||||||||
Sbjct: 7 agctcaggagggatagcgccatgg 30
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 96 gcgctatccatcctgagtt 114
>41640_vvi-MIR390:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatg 34
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatg 34
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatg 34
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 3e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggcgggtcttgaatctt 39
|||||||||||||||||||||| | | |||||||||||
Sbjct: 22 agctcaggagggatagcgccattgatgatcttgaatctt 60
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 39 tgatcttcatttgcgctatccatcctgagtt 69
||||| ||||| |||||||||||||||||||
Sbjct: 76 tgatcctcattagcgctatccatcctgagtt 106
>40294_bna-MIR390c:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 24 agctcaggagggatagcgccatg 46
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 85 gcgctatccatcctgagtt 103
>40292_bna-MIR390a:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 34 agctcaggagggatagcgccatg 56
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 95 gcgctatccatcctgagtt 113
>40072_ath-MIR390a:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 19 agctcaggagggatagcgccatg 41
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtt 87
>39863_aly-MIR390b:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 20 agctcaggagggatagcgccatg 42
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 91 gcgctatccatcctgagtt 109
>39862_aly-MIR390a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 30 agctcaggagggatagcgccatg 52
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 80 gcgctatccatcctgagtt 98
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccat 22
||||||||||||||||||||||
Sbjct: 22 agctcaggagggatagcgccat 43
>40293_bna-MIR390b:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccat 22
||||||||||||||||||||||
Sbjct: 19 agctcaggagggatagcgccat 40
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccat 22
||||||||||||||||||||||
Sbjct: 17 agctcaggagggatagcgccat 38
>42785_zma-MIR390b:mirbase
Length = 192
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 3 agctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 3 agctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 4 agctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 20 agctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 20 agctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 32 agctcaggagggatagcgcc 51
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgcc 31
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagtt 97
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgcc 31
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagtt 97
>40371_rco-MIR390a:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 7 agctcaggagggatagcgcc 26
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 gcgctatccatcctgagtt 69
|||||||||||||||||||
Sbjct: 82 gcgctatccatcctgagtt 100
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 29 agctcaggagggatagcgcc 48
