miRNEST 2.0, an integrative microRNA resource :: BLAST
>41623_vvi-MIR171b:mirbase
Length = 99
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 68
Query: 61 tgattgagccgcgtcaatatc 81
|||||||||||||||||||||
Sbjct: 69 tgattgagccgcgtcaatatc 89
>41281_ctr-MIR171:mirbase
Length = 371
Score = 61.9 bits (31), Expect = 6e-11
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 1 ggtattggcgtgcctcaatttaaagacatggttagatgaagagat-attagccatgtgat 59
|||||||||| |||||||||||||||| |||||| ||| | || ||||||||||| |
Sbjct: 42 ggtattggcgcgcctcaatttaaagacgtggttaaatg--ggcatgattagccatgtatt 99
Query: 60 ttgattgagccgcgtcaatatc 81
|| |||||||||||||||||||
Sbjct: 100 ttcattgagccgcgtcaatatc 121
>40696_mtr-MIR171b:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 6e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 44 atattagccatgtgatttgattgagccgcgtcaatatc 81
|||| |||||||| |||||||||||||||||||||||
Sbjct: 52 atatcagccatgtagtttgattgagccgcgtcaatatc 89
>42773_zma-MIR171m:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 49 agccatgtgatttgattgagccgcgtcaatatc 81
|||||||| || ||||||||||||||||||||
Sbjct: 49 agccatgttcttggattgagccgcgtcaatatc 81
>42772_zma-MIR171l:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 49 agccatgtgatttgattgagccgcgtcaatatc 81
|||||||| || ||||||||||||||||||||
Sbjct: 45 agccatgttcttggattgagccgcgtcaatatc 77
>42553_sbi-MIR171h:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 49 agccatgtgatttgattgagccgcgtcaatatc 81
|||||||| || ||||||||||||||||||||
Sbjct: 47 agccatgttcttggattgagccgcgtcaatatc 79
>41989_osa-MIR171i:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 gattgagccgcgtcaatatc 81
||||||||||||||||||||
Sbjct: 89 gattgagccgcgtcaatatc 108
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 ggtattggcgtgcctcaat 19
|||||||||||||||||||
Sbjct: 9 ggtattggcgtgcctcaat 27
>41540_sly-MIR171c:mirbase
Length = 121
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tttgattgagccgcgtcaatatc 81
||||||||||||||| |||||||
Sbjct: 76 tttgattgagccgcgccaatatc 98
>41231_csi-MIR171a:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tttgattgagccgcgtcaatatc 81
||||||||||||||| |||||||
Sbjct: 65 tttgattgagccgcgccaatatc 87
>41211_ccl-MIR171:mirbase
Length = 321
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tttgattgagccgcgtcaatatc 81
||||||||||||||| |||||||
Sbjct: 120 tttgattgagccgcgccaatatc 142
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 51 ccatgtgatttgattgagccgcgtcaatatc 81
||||||| ||||||||||||| | |||||||
Sbjct: 111 ccatgtgttttgattgagccgtgccaatatc 141
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tttgattgagccgcgtcaatatc 81
||||||||||||||| |||||||
Sbjct: 77 tttgattgagccgcgccaatatc 99
