miRNEST 2.0, an integrative microRNA resource :: BLAST
>41528_sly-MIR159:mirbase
Length = 177
Score = 337 bits (170), Expect = 2e-93
Identities = 177/178 (99%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 attcctcagccctatctatttatgatttcaaacatatagataggtttgtgggtttgcata 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 attcctcagccctatctatttatgatttcaaacatatagataggttt-tgggtttgcata 119
Query: 121 tgtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctcta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctcta 177
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 60.0 bits (30), Expect = 6e-10
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 114 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 173
|||||||| |||||||||||||| ||| |||| |||| |||||||||||||||||||
Sbjct: 116 ttgcatatctcaggagctttatt--acctaatgttagatctttttttggattgaagggag 173
Query: 174 ctcta 178
|||||
Sbjct: 174 ctcta 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaa 30
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 56.0 bits (28), Expect = 9e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
|||||||||||||||||||| | | ||| || || || |||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 attcctcagccctatc 76
|| || ||||||||||
Sbjct: 69 atcccacagccctatc 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>41218_csi-MIR159:mirbase
Length = 216
Score = 48.1 bits (24), Expect = 2e-06
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacaaaaaatctaaca-ggttaaattgagctgctgacctatg 59
|||||||||||||||||||| | | |||| || || |||||||||||||||| |||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 gattcctcagccctat 75
||| || ||| |||||
Sbjct: 72 gatcccacagtcctat 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 ttttttggattgaagggagctcta 178
||||||||||||||||||||||||
Sbjct: 183 ttttttggattgaagggagctcta 206
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttttggattgaagggagctcta 178
|||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaa 30
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttttggattgaagggagctcta 178
|||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaa 30
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 41 attgagctgctgacctatggattcctcagccctat 75
||||||||||||| |||||||| || |||||||||
Sbjct: 44 attgagctgctgagctatggatcccacagccctat 78
Score = 44.1 bits (22), Expect = 4e-05
Identities = 55/65 (84%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 114 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 173
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 170
Query: 174 ctcta 178
|||||
Sbjct: 171 ctcta 175
>40397_ahy-MIR159:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaca 22
||||||||||||||||||||||
Sbjct: 3 tggagctccttgaagtccaaca 24
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 2 tggagctccttgaagtccaa 21
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 2 tggagctccttgaagtccaa 21
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctcta 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctcta 195
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 21 tggagctccttgaagtccaa 40
>40311_bra-MIR159a:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
