miRNEST 2.0, an integrative microRNA resource :: BLAST
>39804_aly-MIR159a:mirbase
Length = 222
Score = 252 bits (127), Expect = 8e-68
Identities = 168/183 (91%), Gaps = 2/183 (1%)
Strand = Plus / Plus
Query: 1 agagctcctttaagttcaaacgagagtttagtagggtaaagaaaagctgctaagctatgg 60
|||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 22 agagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatgg 81
Query: 61 atcccataagccctaatccttatagagagnnnnnnnnggatttggttatatggcttgcat 120
|||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 82 atcccataagccctaatccttataaaga--aaaaaaaggatttggttatatggcttgcat 139
Query: 121 atcttaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagc 180
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 140 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 199
Query: 181 tct 183
|||
Sbjct: 200 tct 202
>40311_bra-MIR159a:mirbase
Length = 185
Score = 230 bits (116), Expect = 3e-61
Identities = 163/180 (90%), Gaps = 5/180 (2%)
Strand = Plus / Plus
Query: 4 gctcctttaagttcaaacgagagtttagtagggtaaagaaaagctgctaagctatggatc 63
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
Query: 64 ccataagccctaatccttatagagagnnnnnnnnggatttggttatatggcttgcatatc 123
||||||||||||||||||||| | | ||||||||||||||||||| ||||||
Sbjct: 68 ccataagccctaatccttatatata-----aaaaggatttggttatatggcttacatatc 122
Query: 124 ttaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 230 bits (116), Expect = 3e-61
Identities = 163/180 (90%), Gaps = 5/180 (2%)
Strand = Plus / Plus
Query: 4 gctcctttaagttcaaacgagagtttagtagggtaaagaaaagctgctaagctatggatc 63
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
Query: 64 ccataagccctaatccttatagagagnnnnnnnnggatttggttatatggcttgcatatc 123
||||||||||||||||||||| | | ||||||||||||||||||| ||||||
Sbjct: 66 ccataagccctaatccttatatata-----aaaaggatttggttatatggcttacatatc 120
Query: 124 ttaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
>40016_ath-MIR159a:mirbase
Length = 184
Score = 214 bits (108), Expect = 2e-56
Identities = 163/183 (89%), Gaps = 3/183 (1%)
Strand = Plus / Plus
Query: 1 agagctcctttaagttcaaacgagagtttagtagggtaaagaaaagctgctaagctatgg 60
|||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 3 agagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatgg 62
Query: 61 atcccataagccctaatccttatagagagnnnnnnnnggatttggttatatggcttgcat 120
||||||||||||||||||||| || || |||||||||||||||| ||||||
Sbjct: 63 atcccataagccctaatccttgtaaag---taaaaaaggatttggttatatggattgcat 119
Query: 121 atcttaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagc 180
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 120 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 179
Query: 181 tct 183
|||
Sbjct: 180 tct 182
>39805_aly-MIR159b:mirbase
Length = 202
Score = 89.7 bits (45), Expect = 7e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 agagctcctttaagttcaaacgagagtttagtagggtaaagaaaagctgctaagctatgg 60
|||||||||| |||||||| ||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 16 agagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgg 75
Query: 61 atcccataa 69
|||||||||
Sbjct: 76 atcccataa 84
Score = 63.9 bits (32), Expect = 4e-11
Identities = 67/76 (88%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 109 tatggcttgcatatcttaggagctttaacttgccc-tttaattgcttttactcttctttg 167
||||| || ||||||| ||||||||| |||| ||| |||||| |||| |||||||||||
Sbjct: 114 tatggattccatatctcaggagctttcacttacccctttaatggcttc-actcttctttg 172
Query: 168 gattgaagggagctct 183
||||||||||||||||
Sbjct: 173 gattgaagggagctct 188
>40017_ath-MIR159b:mirbase
Length = 196
Score = 87.7 bits (44), Expect = 3e-18
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1 agagctcctttaagttcaaacgagagtttagtagggtaaagaaaagctgctaagctatgg 60
|||||||||| |||||||| ||| |||||| ||||| ||| ||||||||||||||||||
Sbjct: 4 agagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgg 63
Query: 61 atcccataagcc 72
||||||||||||
Sbjct: 64 atcccataagcc 75
Score = 61.9 bits (31), Expect = 2e-10
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 118 catatcttaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 176
||||||| ||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 177 gagctct 183
|||||||
Sbjct: 181 gagctct 187
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 160 cttctttggattgaagggagctct 183
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 160 cttctttggattgaagggagctct 183
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 160 cttctttggattgaagggagctct 183
||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctct 194
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 161 ttctttggattgaagggagctct 183
|||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctct 171
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tctttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>40397_ahy-MIR159:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 agctgctaagctatggatccca 66
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctct 183
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 aagctgctaagctatggatcc 64
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 112 ggcttgcatatcttaggagcttta 135
||||||||||||| ||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctct 183
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 aagctgctaagctatggatcc 64
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 112 ggcttgcatatcttaggagcttta 135
||||||||||||| ||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctct 183
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>42700_zma-MIR159k:mirbase
Length = 200
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctct 183
||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctct 183
||||||||||||||||||||
Sbjct: 231 tttggattgaagggagctct 250
