miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39385_pab-MIR482c:mirbase
Length = 137
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 ggagtgggagcagaggataagactgctgctttgaatattatcagtctttcctactcctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ggagtgggagcagaggataagactgctgctttgaatattatcagtctttcctactcctcc 100
Query: 61 cattcc 66
||||||
Sbjct: 101 cattcc 106
>41687_vvi-MIR482:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 agtctttcctactcctcccattcc 66
||||||||||||||||||||||||
Sbjct: 84 agtctttcctactcctcccattcc 107
>39430_pta-MIR482b:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 42 cagtctttcctactcctcccattcc 66
||||||| |||||||||||||||||
Sbjct: 66 cagtcttccctactcctcccattcc 90
>39429_pta-MIR482a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 42 cagtctttcctactcctcccattcc 66
||||||| |||||||||||||||||
Sbjct: 66 cagtcttccctactcctcccattcc 90
>39383_pab-MIR482a:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 42 cagtctttcctactcctcccattcc 66
||||||| |||||||||||||||||
Sbjct: 75 cagtcttccctactcctcccattcc 99
>41557_sly-MIR5301:mirbase
Length = 188
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 45 tctttcctactcctcccat 63
|||||||||||||||||||
Sbjct: 112 tctttcctactcctcccat 130
>41065_ghr-MIR482a:mirbase
Length = 171
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 45 tctttcctactcctcccat 63
|||||||||||||||||||
Sbjct: 107 tctttcctactcctcccat 125
>39431_pta-MIR482c:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 40 atcagtctttcctactcctcccattcc 66
||||||||| |||| ||||||||||||
Sbjct: 53 atcagtcttccctattcctcccattcc 79
